AMCG00018127


Basic Information

Item Value
gene id AMCG00018127
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2328704 ~ 2334031 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018127
ATGGACTGTCCGGTTCTGGCCGGCTGGCGCGGGCGTCCCTGTGTGGTCTGTGCGGCCGCTCTTTGGAAGGCTAGGTTTACTGACGCGGGGCTGAAGACCTACCTGATCTCGGGCCGGCGTGCCGAGCCATCGCAGTGCAGCTGCTCCCAGCTGGGCCCGGCAGGGCAGGACCCTGGGGACGGGCTGCCAACGGCTTCCAGGGCACAGACCCCCGACCCTGCCCCCACACCTGGCGGCACGCTCCCCTGCGGCCCAGCCGACAGAGCCAAGCCACCCTGCCCGTCCTGCAGCGTGGACCCGATGCCCAGCTGTGAGGTCCCTGTGGATGACGGCGCCGTGCAGAACGGGTGCCAAGAGGAGCACAAGAACAACGCCAAGGTTCTGCCGGGCCGGAGCGCCAAGGCCCAGAACGGCCTGCTGAGCCCGCCCCCGGAGGACAAGCTGACCAACAGCCAGACGTCCCTGTGCGAGATGCtgcaggagaaggagaagaagtggGGCGTGGTCAGCATGGACCACTCGGCCCTCATCCCGCTGCGCTCCAAGAACTTCCGGGAGAGGAGCGACGCGCACTTCGTGGACGTCATCAAGGAGGACAGTCTGATGAAGGATTACTTCTTCAAGCCGCCCATCAACAAGCTCAGCCTCAACTTCCTGGAGAAGACCCTGGAGTCGGCCTCCTTCCTGGACATATTGCTGTCCTCGGCTGTGTTCCTCGCCCTCACGGTGGCCTGCTTCCTGCGGCCCTGCATCTCTGGCCCCCCGCCGCCCCCCGCTGCCATCGCCGTGTGCGTGCTGGCCGTGCTGCTGGAGGGCGTCTCCCTGGGGCTGTCCGTACGgatGGCGTTTTACCTGGACAGCGTCATGAGCTGCACCCGGCGGCTGCTGCTGGCGATCTCGGGCTCCGTGCCGCGGCACCTGATCGGGGCCGGGCTGATCTCGCTGCCTGCCCTCTCTGTCTTCACCCACATCACCTGCCCCTTCCACCTGTCCATCCAGTTCACCATGTTCCTCTGCTGCGCTGCCACCATCGCCATCATCCACTACTGCAACTTCTGCCAGCTGAGCTTCTGGATGCGCTCGGCCCTGGCCACGGCGGTGGGCGCCCTGCTGCTGGTCCTGCTCTACGCGCCGCTCTGCGCTCACCAGTTCGACTCCACTAACGGCTCCACAGCCGAGGGGACGGAGACGGGGCCGGACGCTGGGGCTGGGACAAGACCACAGGACCTGATCGGCCCGGAGGCCATCCTGGCGttcttcctgctgctgctgctggtgtgGTTCCTGAACCGCGAGTTCGAGGTGAGCTACCGGCTGCACTACCACGGCAACGTGGAGGCCGACCAGCACCGCATCAAGATCCAGAACATGCGGGACCAGGCGGACTGGCTGCTGCGCAACATCATCCCTGTGCACGTGTCGGAGCAGCTGAAGGTCACGCAGAGCTACTCCAAGAACCACGACAACGTGGGCGTGATCTTCGCCAGCATCGTCAACTTCAGCGAGTTCTACGAGGAGAACTACGAGGGCGGCAAGGAGTGCTACCGGGTCCTGAACGAGCTGATCGGAGACTTCGACGAGCTGCTGCGCAAGCCGGCCTTCAACAACATCGAGAAGATCAAGACCATTGGCGCCACCTACATGGCCGCCTCGGGCCTGAACGCCTCGCAGTGCCAGGACAGTGCCCACCCCCACGGGCACCTGCGCACGCTGTTCGACTTCGCCATGGAGATGATGCGCGTGGTGGACGACTTCAACAAGGACATGCTGTGGTTCAACTTCAAGCTGCGCATCGGCTTCAACCACGGGCCACTGACCGCCGGCGTCATCGGCACCACCAAGCTGCTGTACGACATCTGGGGTGACACGGTGAACATCGCCAGCCGCATGGACACCACGGGTGTGGAGTGCCGCGTGCAGGTGAGCGAGGAGAGCCACCGCGTGCTCAAAGAGATGGGCTACGAGTTTGACTACCGCGGCACGGTCAACGTCAAGGGCAAGGGCCAGATGAAGACCTTCCTCTTCCCCAAGAGCGTGGACAGCGGCATGGTGCCCCAGCACCAGCTCTCCGTGTCGCCCGACATCCGCGTGCAGGTGGACGGCAGCATTGGCCGCTCCCCCACCGACGAGCTCGCCAACATGGTGCCCACGTGCGCCACCCAGGGACCGGAGCGCGGCCCCCAGAGAGCTACAGAGACACCTGAGGCCAAGGACATGCTGGGCCAGCCCAAGGGCCCTGCCGCTGTGGCCACCAGTCCCGTCCAGGGGCCGAGGCCAGCTCCGGCTCATGCCACAGCCTCCACCCCGGCCCCTGCCGCCCCGACGGGGCCCCTGAAGCAGGAGGGacaggaggaggagctggaggaggagctgagCGAACTGACGAGACTCAAACCTGCAGACAGCCTATGA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016829 lyase activity molecular_function

KEGG:

id description
K08049 ADCY9; adenylate cyclase 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018127 True 2412 mRNA 0.66 9 2328704 2334031

Neighbor

gene id symbol gene type direction distance location
AMCG00018125 NA coding upstream 23260 2302964 ~ 2305444 (+)
AMCG00018124 srl,LOC107661647,LOC107718567,LOC107553668,LOC107695714 coding upstream 36944 2281697 ~ 2291760 (+)
AMCG00018120 LOC106601835,LOC107695711 coding upstream 115780 2211509 ~ 2212924 (+)
AMCG00018121 NA coding upstream 125374 2200435 ~ 2203330 (+)
AMCG00018116 NA coding upstream 209914 2116615 ~ 2118790 (+)
AMCG00018126 crebbpb,LOC108440697,LOC102779454 coding downstream 22246 2356277 ~ 2382087 (+)
AMCG00018129 trap1 coding downstream 51269 2385300 ~ 2391998 (+)
AMCG00018128 NA coding downstream 59274 2393305 ~ 2401409 (+)
AMCG00018131 NA coding downstream 87234 2421265 ~ 2432982 (+)
AMCG00018133 NA coding downstream 99367 2433398 ~ 2433656 (+)
G114359 NA non-coding upstream 278527 2048571 ~ 2050177 (+)
G114346 NA non-coding upstream 307074 2006906 ~ 2021630 (+)
G114332 NA non-coding upstream 344554 1983651 ~ 1984150 (+)
G114326 NA non-coding upstream 358295 1969780 ~ 1970409 (+)
G114323 NA non-coding upstream 375440 1952874 ~ 1953264 (+)
G114484 NA non-coding downstream 76446 2410477 ~ 2412789 (+)
G114485 NA non-coding downstream 82776 2416807 ~ 2417796 (+)
G114531 NA non-coding downstream 239606 2573637 ~ 2573867 (+)
G114548 LOC104962440 non-coding downstream 275112 2609143 ~ 2609412 (+)
G114553 NA non-coding downstream 334429 2668460 ~ 2668661 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 61929 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 346138 1979046 ~ 1982566 (+)
G114330 NA other upstream 349977 1977004 ~ 1978727 (+)
AMCG00018105 NA other upstream 354780 1972838 ~ 1973924 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other upstream 379111 1947841 ~ 1949593 (+)
G114518 NA other downstream 157282 2491313 ~ 2568938 (+)
G114551 NA other downstream 306815 2640846 ~ 2647774 (+)
AMCG00018196 NA other downstream 1852379 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 2260902 4594933 ~ 4604105 (+)
G115049 NA other downstream 2427487 4761518 ~ 4763905 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026124 CR339059.1 coding NC_007114.7 CM002887.2 9737490 ~ 9738985 (-)
grasscarp (Ctenopharyngodon idella) G390517 NA non-coding CI01000208 null 57781 ~ 64167 (+)
rainbow trout (Oncorhynchus mykiss) G1191529 LOC106601890 misc NC_048577.1 CM023231.2 59381313 ~ 59388776 (+)
tiger barb (Puntius tetrazona) G16953 adcy9,LOC107695715,LOC107718568,LOC107715643,LOC107553626,LOC107661757,LOC101884360 unknown NC_056701.1 CM032070.1 4403097 ~ 4407697 (-)
mexican tetra (Astyanax mexicanus) G18648 NA non-coding NC_035899.1 CM008302.1 13765551 ~ 13839088 (-)