AMCG00018215 (tmem204)


Basic Information

Item Value
gene id AMCG00018215
gene name tmem204
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4610842 ~ 4620287 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018215
GGAAATTCCCCAAATCTTTAGGGGCCCTGCGACCGGCGGGAAGCGGCAGGCTGTGAGCTCTCTCAGCCCGGCCTCTCTGCACGGCGGCACTGGGAGTCCAGGACCACGGACGCCCACCTCTCCACTGCCATTTAggtatatttaaacacatatcaCACGTTAGATTCACACTGTTGTTCTGGTGTACAGGTCGGTCGGACTAGAGACGGGGTGAAGCTGCTGGAGACAGCGGGGAAGTGAGGGAGGGGGGGTCTGAAATCTGTCACCCCAGTCCTTTTCCTCTCAGGAAACGCATCCTGTTGCTGTTTGGCGGCCGGGGCAGAGTGTTTGTCGCAGcgagggagcgggagagagagagagcacgcCCCGAGTCTCGCCACAACACTCGGCAGCTCCGTCCTCCCCTGCTCAGTGCAGAGCACGCACACAGCCCGATTCACTGCTGCCTGCCCGGGTCACAGACACCAAGATTGCCTTTCACATCTGGAGCTCAGCTGCACCGCACTGCCAGACAGGGGACCAAGGGGGCGCGGCGTTCCTCAGACCGGGAGAGTAATTTACAGCTGTGGGGCTCGGCGGCAACCCCTTTGCTGCACAAGCAGAGGATCTAGTTTCTTTTCTTCCATCCCTCCACCCCCGTGGAGAAGcggattttctttttctttttttaaaagaggCAACCGCCTCTGCAGTTTGCCTCCAGCAGCCCTCGGAGCTCCGAGGAAAAACAGCACGGAGAACAAAAAGAGACAGATAGGAAAAGAGACGGAGAGAAAGTtgcagcagcagcggcagcagtAGGGAAGCCAGAGGAATGGACCTGACTGCCTGCTGGATAAACCCACGTCTGCCTGCGGTGCCCAAGTCTGAGGAGGAGGGGTAAATGCTCCGGACTGTCTCACACTGACTGGATGAGAATGAACGGAGATGTTCTCTAGCTGagattttaaagcagttttcattctttcttctgCCCCCcgtttttaattgtgattttctgCGGCGGATGCCCCACAACTGATCGCCGGGGCTCGCTCAGCAGTGGAGGGGGAGGAGGCAGCAGAGAGAGACTGTCCTGCCGGGGAGTGGAGGAGCAGGGGGGAGGGAGGGTGCATGGCCGTGCAGAGGCTGGTGGCGGCGGCGGTGGCGGTGGCCCTGCTGTCCCTGATCCTCAACAACGTGGCGGCCTTCACGCCCAGCTGGGTGTTCCAGACACTGGAGGACGGCCGCAAGCGCAGTGTGGGTCTGTGGCGGCTGTGCCCGGTGGCGGAGCGCGGCCGGGAGGTGGCGGCGGGCGGCGGGCGGCAGAGCCAGGAGGGGGAGCGCCAGTGCCAGTCCCTGAGCTGGGGGTCGGAGTACTCTGGTTTCCAGGAGTCCCGCAGCACTGTCAAGTTGCAGTTTGACATGATGCGCGCCTGCAACCTGATGGCCACGGTGGCGCTGACGGCCGGGCAGCTCATCTTCCTGCTGGGCCTGGTGGAGCTGCCCTTCGTCACGCAGGAATCCCAGTGGTGGGAGGAGGCCATCGCCGCGCTCTTCCAGCTAGCCAGTTTCGTGCTGGTGATCGGCCTGGTGACGTTCTATAGGATCGGGCCGTACACACACCTGTCCTGGTCGTGCTACGTGGATATCGGCGCCTGTCTGCTGGCCACGCTGGCGGCCGCCATGCTGATCTGGAACATCCTGCACCGGCGCGACGACTGCCTCACCCCGCGCGTCATCGTCATCAGCCGCTCGCTCGCCGCCCCCTTCCGCCCGCGGCTCGACAACGACTACGTGGAGTCCCCCTGCTGAGCCCCGCCACCCCTCTGCCCCCTGGGGGGCTCCAGACGGGACTGAGCGAACACTGCAGGAGGGGCAGATGGGGTTGGGTGGGGGCAGAGACACTGGCACTAACCCTACCGCTCCTGGCTGACTCACGGAGACGAGGGGAGGCTTTATTGCTCCTCACACTTTGGACTAACGTGCTTTGCTTTGTGTCGGTTCCCTTTTTTTCTAATTGCATCAGTTCGTGGTGTCCTACAAACTCTAGAACTCATCCAAACAGTTCTCACACCCGCCAGATCTCAAAAACCTGAGATCCAAAACCCATTGCTGCTTCATGGTGAACCTCCTAGAGTGACTGCTCAAAGATGGGACGAAATACGAGAACGCAGGCCGTGGAAGATGGAACAATCAAGTCTAGCTGTGTCAGAAAAGCACAAAAGCTGATCATTTTGCCTTTACAGCTTAATTtacaaatttatatatataaacagtaaaacacaaaaataaaatacttaaaacacaTGTGCAGAGCTCTGATTTACTCCAAGTTCATGTGGTTAGAAGATTTAAATTGACAAAGACGGCTCTATCACTAGTacatcaatcaaacaaaacaatgaactcTGCAATCTGATGTTAAAGAATATTTGTGTGTTCACTCTCACACTCGGTGACACAAGAGAACAGTgagttattaatgttattaagtTAATAACGTGCATTTACTGCGTACAGGGCTGGAAGCAAATGAGCAGATGCAACAGTTTTTGAGTTTTGGATAAAGAGTTCATAGACAGAGGCTGAGCCAAATCAGCGAGAAATGAACAGGGGCAACTGCTGTTAATGACCATTATAGGAGCAACATTTGGTTCAGTTTGATTTACGATTTACAATTTTATTCCAaagcattttattaacattgtagTGGCATAAATTATTTCTTCCTACCATTAAAAACACTGGCAGCTTTCCCCCCGAACATATAAAAATAGCAGTTAAAAATCCCTTCCTTTAATATACGTATGACATGAATTTCCCAAATGTTTCCTAGGGCCTACAGCAACTGTCCATTCACTAGATTGAAGAGAGTTTTTATTTGCTATGTTATAGACCCCTTAAGTCATCACCAAACTGTATAGTGAGGTCCGATACACCAGACACCGCGGTGTTTGCAAGGAACCGCTTCGCTGACCTCTCTGTAACCTATTGTGAGAAGATGCCAAGCTGGATCTTGATGTCTTTCATTCTCATCCCATTATCATATTCTATCttaataaaaaactattttcattattcattagaCAGAGCTTACAAACCATAAACCAATGCACCTAACCACCAACAAACGTTCATGTGCGCCAGTTGACCAAGAACTGGATTTTAACTCAAAGTTCTGAAACTCTATACCATTAACTAACCACACCCACTGTATCTGAAACATATATAACTGTATCCACGTGGCCAAACTGTCAGACAACACGCGCCATTACGGAAAAGGACAAAGGGACACGAATGTAAAGCAACAATAAATTATATGCACTCAGTCAGGATTCATTTCTCTGGATCATCTCCTTGCTTGAAGTGGTACATATGCTGAATTGTATTTGgttgtattaattatttgctATTACATTCATTTGCTAATGATGTTGTCAGAATTCCCTTTTGAAAGGAGTTCAAACAGAATGTGTTAATTTCCTATCTTAAAAAGGAATaaagaattataattataaga

Function

symbol description
tmem204 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in female organism. Orthologous to human TMEM204 (transmembrane protein 204).

NR:

description
PREDICTED: transmembrane protein 204

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018215 True 3502 mRNA 0.51 3 4610842 4620287

Neighbor

gene id symbol gene type direction distance location
AMCG00018212 NA coding upstream 25930 4569833 ~ 4584912 (+)
AMCG00018213 decr2,LOC107677236,LOC107667207 coding upstream 81503 4526000 ~ 4529339 (+)
AMCG00018214 NA coding upstream 86504 4518463 ~ 4524338 (+)
AMCG00018211 xpo6,LOC106600647 coding upstream 95754 4494443 ~ 4515088 (+)
AMCG00018204 LOC104948217 coding upstream 262882 4342934 ~ 4347960 (+)
AMCG00018218 NA coding downstream 9113 4629400 ~ 4639869 (+)
AMCG00018217 NA coding downstream 20871 4641158 ~ 4646266 (+)
AMCG00018225 NA coding downstream 111861 4732148 ~ 4737892 (+)
AMCG00018224 NA coding downstream 127023 4747310 ~ 4748167 (+)
AMCG00018231 amdhd2,LOC107661858 coding downstream 196543 4816830 ~ 4819594 (+)
G114985 NA non-coding upstream 16997 4593460 ~ 4593845 (+)
G114984 NA non-coding upstream 20768 4589295 ~ 4590074 (+)
G114940 NA non-coding upstream 223953 4386180 ~ 4386889 (+)
G114888 NA non-coding upstream 309164 4298638 ~ 4301678 (+)
G114868 NA non-coding upstream 412792 4194277 ~ 4198050 (+)
G115061 NA non-coding downstream 193731 4814018 ~ 4814419 (+)
G115099 NA non-coding downstream 474861 5095148 ~ 5100938 (+)
G115188 NA non-coding downstream 696166 5316453 ~ 5317925 (+)
G115201 NA non-coding downstream 724200 5344487 ~ 5344947 (+)
G115331 LOC100136012 non-coding downstream 1425743 6046030 ~ 6046534 (+)
AMCG00018216 telo2 other upstream 6737 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 417512 4186410 ~ 4193330 (+)
G114551 NA other upstream 1963068 2640846 ~ 2647774 (+)
G114518 NA other upstream 2041904 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 2344067 2247853 ~ 2266775 (+)
G115049 NA other downstream 141231 4761518 ~ 4763905 (+)
G115299 NA other downstream 1329176 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 1535201 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 2090195 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 3273340 7893627 ~ 7894449 (+)

Expression


Co-expression Network