G115061


Basic Information

Item Value
gene id G115061
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4814018 ~ 4814419 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144096
CGCGGAAGACACGGTGATATCGGAGGAATAAAGACGGGGATCCGAGGAAACTGGAGCTGGAAGTACCGGATTGCCGGGGACTTAACTTTTACTTCACGTCCGAAATGACACCTTTCCAGCTCACACGAGTTTACATTTCAGTCTCGCATTTCCGGGTTTCTGCTCTGTTTTGACGTGTGTTTTAGTTCATTtcgttttctttgtttccaccTCCGCTTTGGagtttcttgtttaaaacacCGTGAAAGTGCGCCGGACCTCCTACAGTCTCCAGGAAGAGAAATCgctaagggggaaaaaatagacaaaaactTACGCCAGCGACGCGAGCGCGAACGTGGCGGGTGTTTTCAGCCGGACGTTTTAGCCACAAAATGCGTAGAATGGGTTGGTGAATCGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144096 True 402 lncRNA 0.49 1 4814018 4814419

Neighbor

gene id symbol gene type direction distance location
AMCG00018224 NA coding upstream 65851 4747310 ~ 4748167 (+)
AMCG00018225 NA coding upstream 76126 4732148 ~ 4737892 (+)
AMCG00018217 NA coding upstream 167752 4641158 ~ 4646266 (+)
AMCG00018218 NA coding upstream 174149 4629400 ~ 4639869 (+)
AMCG00018215 tmem204 coding upstream 193731 4610842 ~ 4620287 (+)
AMCG00018231 amdhd2,LOC107661858 coding downstream 2411 4816830 ~ 4819594 (+)
AMCG00018233 NA coding downstream 60508 4874927 ~ 4883853 (+)
AMCG00018235 NA coding downstream 158531 4972950 ~ 4994168 (+)
AMCG00018234 LOC106579194,LOC106578326,LOC105031632,LOC103369159 coding downstream 208173 5022592 ~ 5023227 (+)
AMCG00018237 LOC102777150,LOC102206336,LOC101478571,LOC100698643,LOC101065496 coding downstream 243959 5058378 ~ 5059421 (+)
G114985 NA non-coding upstream 220173 4593460 ~ 4593845 (+)
G114984 NA non-coding upstream 223944 4589295 ~ 4590074 (+)
G114940 NA non-coding upstream 427129 4386180 ~ 4386889 (+)
G114888 NA non-coding upstream 512340 4298638 ~ 4301678 (+)
G114868 NA non-coding upstream 615968 4194277 ~ 4198050 (+)
G115099 NA non-coding downstream 280729 5095148 ~ 5100938 (+)
G115188 NA non-coding downstream 502034 5316453 ~ 5317925 (+)
G115201 NA non-coding downstream 530068 5344487 ~ 5344947 (+)
G115331 LOC100136012 non-coding downstream 1231611 6046030 ~ 6046534 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding downstream 1711300 6525719 ~ 6588409 (+)
G115049 NA other upstream 50113 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 209913 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 620688 4186410 ~ 4193330 (+)
G114551 NA other upstream 2166244 2640846 ~ 2647774 (+)
G114518 NA other upstream 2245080 2491313 ~ 2568938 (+)
G115299 NA other downstream 1135044 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 1341069 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 1896063 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 3079208 7893627 ~ 7894449 (+)
G115648 NA other downstream 3305359 8119778 ~ 8122171 (+)

Expression


Co-expression Network