AMCG00018233


Basic Information

Item Value
gene id AMCG00018233
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4874927 ~ 4883853 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018233
TCGCTGGAAAGGAAACTGCAGAGACCCCTTCTGGCAAAGTCACGCACGCTTCCCAGCATCCCCCAGTCCCCCACTGTCGGCCGTGTGCACCACTCAGACCTAGTGGGCGGCAGTCAGGAGCTGGCACCCACCCGCAGAAAACCCAAAACCAGCAGACATCTAATCCTCCGAGTGAGCCTGGAGACGAAACACGGTCTCCTGGGCACAATGGATGTGAGTGGGCATAATTGCCAAAGACTTCCCCTTAAAGGACTTAACAGCTACTCAGAGCAGCGAGCTTCCATTCAGAGAAACCTGAGAGCTAAAAGCCCCGACCGCCTCCTTCAAAACCCCTCGCTCTCCGCTCCGCTTGATGTGGCCGGGCCCCTCACCCGAAATCTGTGTGGCTTCCCTCCCTTGGCCGAGTCAGACTTTTGCCACCCCTTCTCTGCGCCTTCGCCCGGAAATCCGAAATCAAAAAAGGAGCCGGTCTTTGACTCCTGGCGTTGCCTAGCAACTGGAGTCACTGGCACATTTCGGCTCGAACGAGACGCTCTGCACATTCCCGATGCAAgggaggCGTGGCGGCTGGAGGATGACGGCGACGACGACGACGAGAGAGAGCCGGAGGGCCGGCGGCCGCGTGCCGAGGGCCGGCCGCGCTCCCAGTCCCCGTTCTCCCACTTCCGCTCGCGCGCCGCCTACCTGCGCAAGAGCATCTCCGTGGACGACCACCTCGGCCAGGTGGAGTTCGGCACCCCCGCGCCCGAGAGCCGCGCCCCCCGGGGCAAGGGCAAGCTCAAGAGGAAATTCCGTAGTGGAAATCTTGAGGACTCatcacagcagctgcaggacCACACGGAGCTGGTTGAGTGGGTTTGGACGAAGTGTCTGTGGACAGACAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018233 True 885 mRNA 0.61 6 4874927 4883853

Neighbor

gene id symbol gene type direction distance location
AMCG00018231 amdhd2,LOC107661858 coding upstream 55333 4816830 ~ 4819594 (+)
AMCG00018224 NA coding upstream 126760 4747310 ~ 4748167 (+)
AMCG00018225 NA coding upstream 137035 4732148 ~ 4737892 (+)
AMCG00018217 NA coding upstream 228661 4641158 ~ 4646266 (+)
AMCG00018218 NA coding upstream 235058 4629400 ~ 4639869 (+)
AMCG00018235 NA coding downstream 89097 4972950 ~ 4994168 (+)
AMCG00018234 LOC106579194,LOC106578326,LOC105031632,LOC103369159 coding downstream 138739 5022592 ~ 5023227 (+)
AMCG00018237 LOC102777150,LOC102206336,LOC101478571,LOC100698643,LOC101065496 coding downstream 174525 5058378 ~ 5059421 (+)
AMCG00018238 LOC101065496,LOC101160359,LOC106579193,LOC107556665 coding downstream 192266 5076119 ~ 5094692 (+)
AMCG00018236 NA coding downstream 287649 5171502 ~ 5183063 (+)
G115061 NA non-coding upstream 60508 4814018 ~ 4814419 (+)
G114985 NA non-coding upstream 281082 4593460 ~ 4593845 (+)
G114984 NA non-coding upstream 284853 4589295 ~ 4590074 (+)
G114940 NA non-coding upstream 488038 4386180 ~ 4386889 (+)
G114888 NA non-coding upstream 573249 4298638 ~ 4301678 (+)
G115099 NA non-coding downstream 211295 5095148 ~ 5100938 (+)
G115188 NA non-coding downstream 432600 5316453 ~ 5317925 (+)
G115201 NA non-coding downstream 460634 5344487 ~ 5344947 (+)
G115331 LOC100136012 non-coding downstream 1162177 6046030 ~ 6046534 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding downstream 1641866 6525719 ~ 6588409 (+)
G115049 NA other upstream 111022 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 270822 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 681597 4186410 ~ 4193330 (+)
G114551 NA other upstream 2227153 2640846 ~ 2647774 (+)
G114518 NA other upstream 2305989 2491313 ~ 2568938 (+)
G115299 NA other downstream 1065610 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 1271635 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 1826629 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 3009774 7893627 ~ 7894449 (+)
G115648 NA other downstream 3235925 8119778 ~ 8122171 (+)

Expression


Co-expression Network