XLOC_006236


Basic Information

Item Value
gene id XLOC_006236
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 45931157 ~ 45931536 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013680
CAGGCCCAGCTCAGTGTCCTCCATGTCCTCCAGCAGCAGTGTGGATTTCTCCTGCGCTCCTGTTTCCGCTGTGCTTCTCCCAGGCCCAGCTCAATGTCCTCCTCCAGCAGCAGTGTGGATTCCTCCTGTGCTCCTGTTTCCGCTGTGCCTCTCCCAGGCCCAGCTCAGTGTCCTCCTCCATGCCCTCTAGCAGCAGTGTGGATTTCTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013680 True 208 lncRNA 0.60 2 45931157 45931536

Neighbor

gene id symbol gene type direction distance location
XLOC_006235 NA coding upstream 54187 45871425 ~ 45876970 (+)
XLOC_006234 BX914200.1 coding upstream 87218 45840427 ~ 45843939 (+)
XLOC_006233 si:ch211-62a1.3 coding upstream 156342 45709380 ~ 45774815 (+)
XLOC_006232 ldlrap1b coding upstream 285990 45582391 ~ 45645167 (+)
XLOC_006231 maco1b coding upstream 359095 45524475 ~ 45572062 (+)
XLOC_006237 BX936305.2 coding downstream 10622 45942158 ~ 45958468 (+)
XLOC_006238 olig4 coding downstream 35643 45967179 ~ 45968256 (+)
XLOC_006239 bsdc1 coding downstream 48627 45980163 ~ 46000113 (+)
XLOC_006240 marcksl1a coding downstream 245942 46177478 ~ 46180510 (+)
XLOC_006241 CABZ01022272.1 coding downstream 296177 46227713 ~ 46227829 (+)
XLOC_006228 NA non-coding upstream 458474 45455745 ~ 45472683 (+)
XLOC_006225 NA non-coding upstream 639403 45271632 ~ 45291754 (+)
XLOC_006224 NA non-coding upstream 915558 45009947 ~ 45015599 (+)
XLOC_006246 NA non-coding downstream 1055211 46986747 ~ 46987182 (+)
XLOC_006248 CR847786.1 non-coding downstream 1118376 47049912 ~ 47050026 (+)
XLOC_006249 NA non-coding downstream 1257598 47189134 ~ 47453908 (+)

Expression


Co-expression Network