XLOC_006330


Basic Information

Item Value
gene id XLOC_006330
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 430289 ~ 431596 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013714
aaaatttattgatttctaaaaatcaccaggcgaccccccttcattgtcacgcgacccctcggggggtcccgacccccactttgggaacctctgccctaatggactgatagccccaccccaaaggactgatagccgtCCTAAGGAATCGATAGCCCTACCCTAAAGgactgacagcctCATCCTAAAGGATGGATAGCCCCGCCCCAAAGGACTGACAGCTCCGTCCTAATAGACTAATAGACCCACTCTAAAGGACTGTTAACTTAACCCAAAGGGAGCTAGGGTGCTGATTGAAACGCATCTAAGGAAAAGCCTGAGGGAGAGCACACGTCTAACACTTGATTGTTGTGCAGAAGTAGTAAAGTTATACAGCGCCCCCTTGTGTACCAAAACATTTCTGTTTTGCATTAAGCACCATCTAATGTCCGAGTGACCTCATATAATGGAGTTATTTTAGGGGTCTGAAATGAAAGGGATCTGTCCGACATTACCAGGTGACTGCAGACTGACAGCTCTATTACGTTCAGCATTAATATCTCAATGAACAGAGGATCTCTGACCCGATGAGTCCAGTACTGGTGTTGAATGTAGAGTTTATTTTGCACTGATGACCTGAAAATCCCCTGACTCTGGCTTTGCATCTGCTCATAACTGCAATAAATCAAACACAGATATCCTATAATGTGAACAATAATCCTGTTatcaaatgttttatatttgtctTTAAAGAAGTAGAATATACGTGATTGTTGACCATTAATATTTGTACTCTCAACCAGAACAGTTAACAATAAAGGGGAACACGTGTAATGCGTGCTTTCATTCTGTAACATCAGAGatctttattattcatttaacgCACTGCAGAAATGCTTATTTAGTGTTGTcttgattatttagcttgttttatagAAAAACCCACTTATTttggacattatttctgaaaagaaATCTACATcatttacttgtctagaaaacacttcttgatttaagagtttttagatatttg

Function

GO:

id name namespace
GO:0051015 actin filament binding molecular_function
GO:0003779 actin binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013714 True 1009 lncRNA 0.41 2 430289 431596

Neighbor

gene id symbol gene type direction distance location
XLOC_006329 NA coding downstream 8680 397310 ~ 421609 (-)
XLOC_006328 NA coding downstream 47069 377547 ~ 383220 (-)
XLOC_006327 VIT coding downstream 53033 353175 ~ 377256 (-)
XLOC_006326 NA coding downstream 80181 337811 ~ 350108 (-)
XLOC_006325 zgc:171534 coding downstream 92971 330611 ~ 337318 (-)
XLOC_006331 EFEMP1 coding upstream 1194 432790 ~ 438705 (-)
XLOC_006332 NA coding upstream 11778 443374 ~ 445889 (-)
XLOC_006333 heatr5b coding upstream 18406 450002 ~ 479130 (-)
XLOC_006334 NA coding upstream 58142 489738 ~ 494917 (-)
XLOC_006335 nvl coding upstream 84662 516258 ~ 554033 (-)
XLOC_006338 rn7sk misc upstream 394308 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 9833145 10264741 ~ 10264905 (-)
XLOC_006323 NA non-coding downstream 113255 307085 ~ 317034 (-)
XLOC_006320 NA non-coding downstream 182936 243339 ~ 247353 (-)
XLOC_006342 NA non-coding upstream 444349 875945 ~ 877808 (-)
XLOC_006345 NA non-coding upstream 664888 1096484 ~ 1098530 (-)
XLOC_006346 NA non-coding upstream 688593 1120189 ~ 1126101 (-)

Expression


Co-expression Network