XLOC_006332



Basic Information


Item Value
gene id XLOC_006332
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 443374 ~ 445889 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00013715
CATGGATTaaaattaacacaattaattGATCGTTTATTAATTAAGCAATGATTTGCAGTTGTATTAATAGTTTATGTAATCCGAGAGCCTTCCTCCAGCAGCGAGAAACAACCTGCTCACATtcccgaacacacacacacacacacacacacacacagcttcatcAGATCAGCAGCTCCTCCACACACACCGCAGCAGATCTTCAGCACAGCAGAGATGTGGACCGTCAGCCTGATGATGGCAGCGCTGGCCTGTGTGCTTTCTCAAGAAGCCGAGGAGTCTGTGTCCTACACGGtgag

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00013715 True 299 lncRNA 0.47 2 443374 445889

Neighbor


gene id symbol gene type direction distance location
XLOC_006331 EFEMP1 coding downstream 4669 432790 ~ 438705 (-)
XLOC_006330 NA coding downstream 11778 430289 ~ 431596 (-)
XLOC_006329 NA coding downstream 21765 397310 ~ 421609 (-)
XLOC_006328 NA coding downstream 60154 377547 ~ 383220 (-)
XLOC_006327 VIT coding downstream 66118 353175 ~ 377256 (-)
XLOC_006333 heatr5b coding upstream 4113 450002 ~ 479130 (-)
XLOC_006334 NA coding upstream 43849 489738 ~ 494917 (-)
XLOC_006335 nvl coding upstream 70369 516258 ~ 554033 (-)
XLOC_006336 slit1a coding upstream 109432 555321 ~ 638485 (-)
XLOC_006337 polh coding upstream 367690 813579 ~ 824564 (-)
XLOC_006338 rn7sk misc upstream 380015 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 9818852 10264741 ~ 10264905 (-)
XLOC_006326 NA non-coding downstream 93266 337811 ~ 350108 (-)
XLOC_006323 NA non-coding downstream 126340 307085 ~ 317034 (-)
XLOC_006342 NA non-coding upstream 430056 875945 ~ 877808 (-)
XLOC_006345 NA non-coding upstream 650595 1096484 ~ 1098530 (-)
XLOC_006346 NA non-coding upstream 674300 1120189 ~ 1126101 (-)
XLOC_006350 NA non-coding upstream 814597 1260486 ~ 1269605 (-)

Expression



Co-expression Network