XLOC_006345


Basic Information

Item Value
gene id XLOC_006345
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 1096484 ~ 1098530 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013719
TCTccattttgatgttttttatttgatagaTTATTGCCAttttcaaaatattgaaaaaatattggaaaaaaacatacacatttaTTGCACGGATACCACAATGCACCAatagaaaatattcataaaaacacaCTATAAAGGTATTTCCATACGATGCTACATCTTGCTGAATTATAAAATAGCCCattttttacaataaggttacatTAGATGATGtgtttatttactaacatgaagtaaTGTTAAACAATAACtgtatagcatttattaatcacagttcaacaattaataatgcattattgtgCTTGTTAATGCACTGAGAGTTTACAGGAACTAATAATAATGAGTGTATTTTTGAAAGCTATTAAAGAAGATTAACagtcccagtgttgggttgcggctggaagggcatccactttgtaaagcatatgctgaataagttggcggttcattccgctgtggtgaccccagaataataaagatactaagccaaaaggaaaattaatataGGACAGATTACCAAATGCTGTAATTAAAGCGTTGcttattgtattttaatgcatGAACTAATGTAATCTTATTGAAAGTGTGACCATAGAATCAATATAAAATCTGCAAACTCATATAAAAGTAAACTTCATCCTCTTTCAGGTTCTTCAGAGGTAGACGGCTGGAAGGAAAACTGCAGCTAAACACAACACCACGACAAACAGGATTTCCTCTGATTCACAGGAACATCTCTTTATTGATCCACATGAGTGTGTGCGTGTCGTTGGGTTTGCACTCATACTCGATGCTGTTGAAGCTGTTCCCCCACTGGCAGTGGTCTCTCTTGTTGTAGTTGTAGAACTTCACCTGCCAGACCGTCTCGAAAACACCCGCCTGAGTGAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013719 True 892 lncRNA 0.35 2 1096484 1098530

Neighbor

gene id symbol gene type direction distance location
XLOC_006344 plek coding downstream 10511 1070705 ~ 1085973 (-)
XLOC_006343 BFSP1 coding downstream 104026 985442 ~ 992458 (-)
XLOC_006342 NA coding downstream 218676 875945 ~ 877808 (-)
XLOC_006341 AL929536.5 coding downstream 226676 866293 ~ 869808 (-)
XLOC_006340 AL929536.6 coding downstream 231291 861730 ~ 865193 (-)
XLOC_006346 NA coding upstream 21659 1120189 ~ 1126101 (-)
XLOC_006347 pno1 coding upstream 26655 1125185 ~ 1130096 (-)
XLOC_006348 BX323887.1 coding upstream 37932 1136462 ~ 1175570 (-)
XLOC_006349 psmb1 coding upstream 44194 1142724 ~ 1151410 (-)
XLOC_006350 NA coding upstream 161956 1260486 ~ 1269605 (-)
XLOC_006338 rn7sk misc downstream 270259 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 9166211 10264741 ~ 10264905 (-)
XLOC_006334 NA non-coding downstream 601567 489738 ~ 494917 (-)
XLOC_006332 NA non-coding downstream 650595 443374 ~ 445889 (-)
XLOC_006330 NA non-coding downstream 664888 430289 ~ 431596 (-)
XLOC_006329 NA non-coding downstream 674875 397310 ~ 421609 (-)
XLOC_006351 NA non-coding upstream 172398 1270928 ~ 1341882 (-)
XLOC_006352 NA non-coding upstream 206821 1305351 ~ 1308020 (-)
XLOC_006354 NA non-coding upstream 296408 1394938 ~ 1401592 (-)

Expression


Co-expression Network