ckmb (ckmb,ckm,LOC107718278,LOC107690449,LOC107601735,LOC107585550,LOC107743697)


Basic Information

Item Value
gene id ckmb
gene name ckmb,ckm,LOC107718278,LOC107690449,LOC107601735,LOC107585550,LOC107743697
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 13436675 ~ 13439813 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258275.1
TGAGGCTCAAGCATGCATGAGCCGAGCAACCAATGGGCAGCAAACATTGATGTATATAAGCCAAGGTCTGACATCTTGCAAAGTTGGGCAACCCCTACATTGGCTTGGTGAACAGGATCTGATCCCAAGGACTGTTACCTTTTCTCCCATACAGATCGCCGGAAAAGTGCAATCATGACTAAGAACTGCAACAACGATTACAAGATGAAGTTTGCTCTGGAGGAGGAGTACCCTGACCTCTCCCAGCACAACAACCATATGGCCAAGGTCCTGAATAAGGACATCTACAACAAGCTCAGGAGCAAGGCAACCCCCAGTGGTTTCACCCTGGATGACTGCATCCAGACCGGTGTGGACAACCCTGGCCATCCCTTTATCATGACCGTTGGCTGTGTGGCTGGTGATGAGGAGTCCTACGAAGTCTTCAAGGATTTGTTCGACCCCATCATTTCTGACCGTCACGGAGGCTACAAGCCCACCGACAAGCACAGCACTGATCTGAACTGGGAGAACCTGAAGGGTGGTGATGACCTTGACCCCAACTACGTCCAGAGCAGCCGTGTGCGTACTGGCCGCAGCATCAAGGGATTCACCCTGCCTCCCACCAACAGCCGTGGTGAGCGTAGAGCTGTGGAGAAGCTGTCCATTGAGGCTCTGAACAGCCTGGATGGTGAGTTCAAGGGCAAGTACTACCCTCTGAAGGACATGACTGACAAGGAACAGGAGCAGCTCATTGCTgaccacttcctgtttgacaAGCCCGTGTCCCCCCTGCTGTTGGCTGCTGGCATGGCTCGCGACTGGCCTGACGCAAGAGGCATCTGGCACAATGACAACAAGACCTTCCTTGTGTGGGTGAACGAGGAGGATCACCTGCGTGTCATTTCCATGCAGAAGGGCGGCAACATGAAGGAGGTCTTCAAGAGGTTCTGCGTTGGCCTGCAGAAGATTGAGGAGGTCTTCAAGAAGCACAACCACGGTTTCATGTGGAACGAGCATCTTGGTTTCATCCTGACCTGCCCCTCTAACTTGGGTACCGGCCTGCGTGGTGGTGTCCACGTCAAGCTGCCCAAACTCAGCACACATGCCAAATTTGAGGAGATCCTGACCAGACTGCGTCTTCAGAAGCGTGGCACAGGTGGTGTGGACACTGCCTCTGTCGGTGGTGTGTTCGACATCTCCAACGCTGACCGTCTCGGCTCCTCTGAGGTGCAACAGGTACAGCTGGTGGTCGATGGTGTGAAGCTCAtggttgaaatggaaaagaaactgGAGAAGGGCGAGTCCATCGATGACATGATCCCTGCCCAGAAGTAAAATGGCAaaagtgcttttctttttttatttgttctaagCAGTCATGCCATCTTGACTTTTCCAAGAGACACTCCACCTTGCTCCCTTATTTTCctacttttttctctttcctttctttcctgTTGTCTTCTTTTTCCTGCACTTTTCCTTCTTATCTTCCTGTTCCTCCTGTAACATCCTGGGATCAAACCTCCACATAGCTAGAAAACTAGCTATGTTGTATTCACCTAAACGTTTTTTTTGGTTGTACAAAGTTAATAAACGGCCCCATGTAACAATCAAA

Function

symbol description
ckmb Predicted to enable creatine kinase activity. Predicted to be involved in phosphocreatine biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be active in extracellular space. Is expressed in adaxial cell; head; heart; musculature system; and pectoral fin. Orthologous to human CKM (creatine kinase, M-type).
ckm Predicted to enable creatine kinase activity. Predicted to be involved in phosphocreatine biosynthetic process. Predicted to be located in cytosol. Predicted to be active in extracellular space.

NR:

description
creatine kinase M-type-like

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K00933 E2.7.3.2; creatine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258275.1 True 1600 mRNA 0.51 7 13436675 13439813

Neighbor

gene id symbol gene type direction distance location
si:dkey-182i3.11 LOC107683826,LOC107743701 coding downstream 37728 13395061 ~ 13398947 (-)
hmbsb hmbsb,LOC107683832,LOC107743703,LOC108427930,LOC107718294 coding downstream 57096 13374962 ~ 13379579 (-)
abcg4b abcg4b,LOC107585553,LOC107683844,LOC108439979,LOC103370335,LOC104937503 coding downstream 63229 13363504 ~ 13373446 (-)
nlrx1 nlrx1,LOC107690451,LOC107718274 coding downstream 73821 13354101 ~ 13362854 (-)
pdzd3a pdzd3,pdzd3a,LOC107718292,LOC107690470,LOC107601692 coding downstream 82713 13347060 ~ 13353962 (-)
zgc:154093 LOC107743693,LOC107585559,LOC107718281,LOC107683833,LOC107690442,LOC107690441,LOC107601736 coding upstream 21827 13461640 ~ 13463362 (-)
zc3h4 zc3h4,LOC107585556,LOC107683834,LOC107743691,LOC107718283,LOC107601737,LOC107690443 coding upstream 29765 13469578 ~ 13480565 (-)
bbc3 LOC107743728 coding upstream 51740 13491553 ~ 13501031 (-)
rad1 rad1,LOC107601739,LOC107585563,LOC107743754,LOC107690438,LOC107718285 coding upstream 68363 13508176 ~ 13510935 (-)
tmem97 tmem97,LOC107585564,LOC107743752,LOC107690436,LOC107718286 coding upstream 73555 13513368 ~ 13514692 (-)
G106442 NA non-coding downstream 491302 12945087 ~ 12945373 (-)
G106211 LOC107709112 non-coding downstream 596278 12838764 ~ 12840397 (-)
G106184 NA non-coding downstream 695601 12738051 ~ 12741074 (-)
G106137 LOC107657248,LOC107601702,LOC107709130,LOC107586283 non-coding downstream 764227 12672187 ~ 12672448 (-)
G106099 NA non-coding downstream 838102 12598286 ~ 12598573 (-)
G106525 NA non-coding upstream 166371 13606184 ~ 13606897 (-)
G106541 NA non-coding upstream 227758 13667571 ~ 13669379 (-)
G106548 NA non-coding upstream 313509 13753322 ~ 13756160 (-)
G106561 NA non-coding upstream 345365 13785178 ~ 13798248 (-)
G106572 LOC107664934,LOC107743664,LOC107585584,LOC103047044,LOC107744786,LOC107592620,LOC107690414 non-coding upstream 377575 13817388 ~ 13817880 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other downstream 1146623 12280291 ~ 12290052 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other downstream 1403081 12030648 ~ 12033594 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other downstream 1580780 11842766 ~ 11855895 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 2079122 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 2094559 11326512 ~ 11342116 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 14669 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 304742 13744555 ~ 13751057 (-)
G106570 pafah1b1,LOC107744786,LOC107690414,LOC107592620,LOC107743664,LOC107664934,LOC102225619 other upstream 438772 13878585 ~ 13881694 (-)
G106571 lis1a,pafah1b1,LOC107664934,LOC107743664,LOC108431306,LOC103047044,LOC107585584 other upstream 444107 13883920 ~ 13905494 (-)
cluha cluh,LOC107664929,LOC107685050,LOC107743723,LOC107744785 other upstream 468993 13908806 ~ 13925727 (-)

Expression


Co-expression Network