LOC122358630


Basic Information

Item Value
gene id LOC122358630
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11552901 ~ 11554310 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258507.1
TCGATACTGACTCCCGGTTTTGACCCTTTTCCGCTTTTGACCTACGGCTTCGGACTCTCCTCTGATTGGTAGCTCTGCTACTGAAAAAAAGCCCGATCCATTCATGGAAATGGGAGCGATCGGTgctttatcactgtgtGTGGAAACACCTAGAGCCGTGTTTGGTGTGCCCCTCATTAGTCTGAGGAAGAGTGGACAGATGAGGCAGGGTCTTCCTCTGGCGCTCACACACATGGTGGAGTTTGTGGAGAAGCACGGTCTCAGCAAGATCGGCCTGTTCATAGTCGGCGGATCAGTACAACGCTGCAGGGACCTAAAGAAAGGTTTCGATGATGGAGGCTTTCCAGAGCGTGACAGTAGGGATGTAGATACTTGGGCCTCCTTACTGAAACATTTCCTCAAGGAAATACCTGGTGGACTTATCCGGAGCCACACAAGACACAACTGCTGCAGGTGTTCAGGCGTTCCTTTCAGCCCCACCATGTTTAAGGAACAGGGGCAGTGTAATGCTTTGATTAAGCACCTGCTGGACAATCTGATCCACCTGCTGCCAGACATGTATCTTCATGCATCCGCCAGCAACACAGCAGTGAGTTTATTACTCTACTACTCACTCATGTTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258507.1 True 625 mRNA 0.50 4 11552901 11554310

Neighbor

gene id symbol gene type direction distance location
LOC122359552 NA coding downstream 6018 11545222 ~ 11546883 (-)
LOC122358629 NA coding downstream 11737 11540073 ~ 11541164 (-)
LOC122358470 NA coding downstream 19270 11532441 ~ 11533631 (-)
si:ch211-213d14.1 LOC107701402,LOC107659945,LOC107717182,LOC107582659,LOC107713430,LOC107597593 coding downstream 360852 11187419 ~ 11192049 (-)
LOC122358618 LOC107713430,LOC107701402,LOC107659945,LOC107582659,LOC107717182,LOC107597593 coding downstream 365618 11185150 ~ 11187283 (-)
thyn1 thyn1,LOC107713442,LOC107699901,LOC107748590,LOC107597527,LOC107582572 coding upstream 19187 11573497 ~ 11575403 (-)
esamb LOC107713439,LOC107699897,LOC107582569,LOC107748586,LOC107597528 coding upstream 26939 11581249 ~ 11615224 (-)
LOC122358631 NA coding upstream 69596 11623906 ~ 11624695 (-)
LOC122358632 NA coding upstream 84126 11638436 ~ 11638887 (-)
LOC122358633 NA coding upstream 89756 11644066 ~ 11646076 (-)
LOC122358562 NA non-coding downstream 150 11552253 ~ 11552751 (-)
LOC122358462 NA non-coding downstream 13067 11538912 ~ 11539834 (-)
LOC122358725 NA non-coding downstream 26217 11525866 ~ 11526684 (-)
LOC122358535 NA non-coding downstream 39370 11512646 ~ 11513531 (-)
LOC122358449 NA non-coding downstream 127494 11421854 ~ 11425407 (-)
G105716 jam3a,LOC107662760,LOC107699899,LOC107713445,LOC107597526 non-coding upstream 7907 11562217 ~ 11564348 (-)
G105701 vps26b,LOC107713444,LOC107582573,LOC107748589,LOC107699898,LOC106613018 non-coding upstream 14422 11568732 ~ 11571176 (-)
LOC122358516 LOC107741316,LOC107657036 non-coding upstream 76979 11631289 ~ 11631878 (-)
G105767 NA non-coding upstream 99453 11653763 ~ 11654323 (-)
G105771 LOC107699896,LOC107597576,LOC107582568,LOC107748585,LOC107662767,LOC108435297 non-coding upstream 134525 11688835 ~ 11695374 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other downstream 46724 11073281 ~ 11506177 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 195348 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 210785 11326512 ~ 11342116 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other downstream 248091 11302230 ~ 11304810 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 889313 10658934 ~ 10663588 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 288456 11842766 ~ 11855895 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other upstream 476338 12030648 ~ 12033594 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 725981 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1900172 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 2190245 13744555 ~ 13751057 (-)

Expression


Co-expression Network