LOC122358562


Basic Information

Item Value
gene id LOC122358562
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11552253 ~ 11552751 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252630.1
GAAAATGGACTGGACTATTAAAGAGTGTGCCCCACAACTGCCACTCACTGAAATACGattaaagGTTACCAAAACTGGACGACTTGGGCGAATGAGAAAACGATTCAGAGGTTTTTGGAGGAATTTGTGCTCATGCACTCACAGCAGTGACATAGAGCATGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252630.1 True 164 lncRNA 0.43 3 11552253 11552751

Neighbor

gene id symbol gene type direction distance location
LOC122359552 NA coding downstream 5370 11545222 ~ 11546883 (-)
LOC122358629 NA coding downstream 11089 11540073 ~ 11541164 (-)
LOC122358470 NA coding downstream 18622 11532441 ~ 11533631 (-)
si:ch211-213d14.1 LOC107701402,LOC107659945,LOC107717182,LOC107582659,LOC107713430,LOC107597593 coding downstream 360204 11187419 ~ 11192049 (-)
LOC122358618 LOC107713430,LOC107701402,LOC107659945,LOC107582659,LOC107717182,LOC107597593 coding downstream 364970 11185150 ~ 11187283 (-)
LOC122358630 NA coding upstream 150 11552901 ~ 11554310 (-)
thyn1 thyn1,LOC107713442,LOC107699901,LOC107748590,LOC107597527,LOC107582572 coding upstream 20746 11573497 ~ 11575403 (-)
esamb LOC107713439,LOC107699897,LOC107582569,LOC107748586,LOC107597528 coding upstream 28498 11581249 ~ 11615224 (-)
LOC122358631 NA coding upstream 71155 11623906 ~ 11624695 (-)
LOC122358632 NA coding upstream 85685 11638436 ~ 11638887 (-)
LOC122358462 NA non-coding downstream 12419 11538912 ~ 11539834 (-)
LOC122358725 NA non-coding downstream 25569 11525866 ~ 11526684 (-)
LOC122358535 NA non-coding downstream 38722 11512646 ~ 11513531 (-)
LOC122358449 NA non-coding downstream 126846 11421854 ~ 11425407 (-)
LOC122359088 NA non-coding downstream 226256 11325275 ~ 11325997 (-)
G105716 jam3a,LOC107662760,LOC107699899,LOC107713445,LOC107597526 non-coding upstream 9466 11562217 ~ 11564348 (-)
G105701 vps26b,LOC107713444,LOC107582573,LOC107748589,LOC107699898,LOC106613018 non-coding upstream 15981 11568732 ~ 11571176 (-)
LOC122358516 LOC107741316,LOC107657036 non-coding upstream 78538 11631289 ~ 11631878 (-)
G105767 NA non-coding upstream 101012 11653763 ~ 11654323 (-)
G105771 LOC107699896,LOC107597576,LOC107582568,LOC107748585,LOC107662767,LOC108435297 non-coding upstream 136084 11688835 ~ 11695374 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other downstream 46076 11073281 ~ 11506177 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 194700 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 210137 11326512 ~ 11342116 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other downstream 247443 11302230 ~ 11304810 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 888665 10658934 ~ 10663588 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 290015 11842766 ~ 11855895 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other upstream 477897 12030648 ~ 12033594 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 727540 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1901731 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 2191804 13744555 ~ 13751057 (-)

Expression


Co-expression Network