LOC122359552


Basic Information

Item Value
gene id LOC122359552
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11545222 ~ 11546883 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259881.1
GCTTTGAGGACTGTGCTGAAGACTCTTCCAGAGGAACATTTCAATGTCCTCTGTTATCTAATGTACTTCCTGTCCCGTGTTGCCGCTGAGAGTCATTTCAATCGAATGACATCTACAAAGCTGGCAAGCGTTTTTGGATCCAACATCTTTCACGTTCCTTTCAGCCCCACCATGTTTAAGGAACAGGGGCAGTGTAATGCTTTGATTAAGCACCTGCTGGACAATCTGATCCACCTGCTGCCAGACATGTATCTTCATGCATCCGCCAGCAACACAGCAattaaaggTTACCAAAACTGGACGACTTGGGCGAATGAGAAAACGATTCAGAGGTTTTTGGAGGAATTTGTGCTCATGCACTCACAGCAGTGACATAGAGCATGAAAAAGCCTCTGGAGACCAGATATAGAAGAGTAAAGAAACATGAGGGATGGCTTGTAAGGGCCACCGAAAGACACGGGGGTCGGTAAGGGCCACCAAAAGAcaatggggttggtgagggttTACTGGAAGACACTGGGCTTGGTGAGGGTCACCGGAAGAcaatggggttggtgagggccaCCGGAAAACAATAGGGCCGGTGAGAATCATGGGAAGACACTGGGGTCATGAGGGCCAACGAAATACACTGGGGTCGGTGAGGGCCACTGGAAGAttctggggttggtgagggtcactggaagacactggggtcATGAGGGCTAACAAAATACACTGGGGTCGGTGAGGGCCACTGGAAGAtactggggttggtgagggtcacCGAAAGACAATGGAGCCAGTGAGGGCCATCAAAAGAcaatggggttggtgagggtcacTGGAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259881.1 True 832 mRNA 0.51 4 11545222 11546883

Neighbor

gene id symbol gene type direction distance location
LOC122358629 NA coding downstream 4058 11540073 ~ 11541164 (-)
LOC122358470 NA coding downstream 11591 11532441 ~ 11533631 (-)
si:ch211-213d14.1 LOC107701402,LOC107659945,LOC107717182,LOC107582659,LOC107713430,LOC107597593 coding downstream 353173 11187419 ~ 11192049 (-)
LOC122358618 LOC107713430,LOC107701402,LOC107659945,LOC107582659,LOC107717182,LOC107597593 coding downstream 357939 11185150 ~ 11187283 (-)
LOC122359110 LOC107717180,LOC107713465,LOC107597510,LOC107582585 coding downstream 360122 11179336 ~ 11185100 (-)
LOC122358630 NA coding upstream 6018 11552901 ~ 11554310 (-)
thyn1 thyn1,LOC107713442,LOC107699901,LOC107748590,LOC107597527,LOC107582572 coding upstream 26614 11573497 ~ 11575403 (-)
esamb LOC107713439,LOC107699897,LOC107582569,LOC107748586,LOC107597528 coding upstream 34366 11581249 ~ 11615224 (-)
LOC122358631 NA coding upstream 77023 11623906 ~ 11624695 (-)
LOC122358632 NA coding upstream 91553 11638436 ~ 11638887 (-)
LOC122358462 NA non-coding downstream 5388 11538912 ~ 11539834 (-)
LOC122358725 NA non-coding downstream 18538 11525866 ~ 11526684 (-)
LOC122358535 NA non-coding downstream 31691 11512646 ~ 11513531 (-)
LOC122358449 NA non-coding downstream 119815 11421854 ~ 11425407 (-)
LOC122359088 NA non-coding downstream 219225 11325275 ~ 11325997 (-)
LOC122358562 NA non-coding upstream 5370 11552253 ~ 11552751 (-)
G105716 jam3a,LOC107662760,LOC107699899,LOC107713445,LOC107597526 non-coding upstream 15334 11562217 ~ 11564348 (-)
G105701 vps26b,LOC107713444,LOC107582573,LOC107748589,LOC107699898,LOC106613018 non-coding upstream 21849 11568732 ~ 11571176 (-)
LOC122358516 LOC107741316,LOC107657036 non-coding upstream 84406 11631289 ~ 11631878 (-)
G105767 NA non-coding upstream 106880 11653763 ~ 11654323 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other downstream 39045 11073281 ~ 11506177 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 187669 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 203106 11326512 ~ 11342116 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other downstream 240412 11302230 ~ 11304810 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 881634 10658934 ~ 10663588 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 295883 11842766 ~ 11855895 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other upstream 483765 12030648 ~ 12033594 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 733408 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1907599 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 2197672 13744555 ~ 13751057 (-)

Expression


Co-expression Network