LOC122358725


Basic Information

Item Value
gene id LOC122358725
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11525866 ~ 11526684 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252636.1
GCAGTGTAATGCTTTGATTAAGCACCTGCTGGACAATCTGATCCACCTGCTGCCAGACATGTATCTTCATGCATCCGCCAGCAACACAGCAattaaagGTTACCAAAACTGGACGACTTGGGCGAATGAGAAAACGATTCAGAGGTTTTTGGAGGAATTTGTGCTCATGCACTCACAGCAGTGACATAGAGCATGAAAAAGCCTCTGGAGACCAGATATAGAAGAGTAAAGAAACATGAGGGATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252636.1 True 247 lncRNA 0.45 3 11525866 11526684

Neighbor

gene id symbol gene type direction distance location
si:ch211-213d14.1 LOC107701402,LOC107659945,LOC107717182,LOC107582659,LOC107713430,LOC107597593 coding downstream 333817 11187419 ~ 11192049 (-)
LOC122358618 LOC107713430,LOC107701402,LOC107659945,LOC107582659,LOC107717182,LOC107597593 coding downstream 338583 11185150 ~ 11187283 (-)
LOC122359110 LOC107717180,LOC107713465,LOC107597510,LOC107582585 coding downstream 340766 11179336 ~ 11185100 (-)
arhgap32a arhgap32a,LOC107713447,LOC107662764,LOC107582574,LOC107699902,LOC107597520 coding downstream 453356 11045951 ~ 11072510 (-)
ncam1b LOC107748595 coding downstream 670682 10773572 ~ 10855184 (-)
LOC122358470 NA coding upstream 5757 11532441 ~ 11533631 (-)
LOC122358629 NA coding upstream 13389 11540073 ~ 11541164 (-)
LOC122359552 NA coding upstream 18538 11545222 ~ 11546883 (-)
LOC122358630 NA coding upstream 26217 11552901 ~ 11554310 (-)
thyn1 thyn1,LOC107713442,LOC107699901,LOC107748590,LOC107597527,LOC107582572 coding upstream 46813 11573497 ~ 11575403 (-)
LOC122358535 NA non-coding downstream 12335 11512646 ~ 11513531 (-)
LOC122358449 NA non-coding downstream 100459 11421854 ~ 11425407 (-)
LOC122359088 NA non-coding downstream 199869 11325275 ~ 11325997 (-)
G105694 NA non-coding downstream 219352 11304983 ~ 11306514 (-)
G105674 pou2af1,LOC107582583,LOC107713464,LOC107717181 non-coding downstream 354127 11169121 ~ 11171739 (-)
LOC122358462 NA non-coding upstream 12228 11538912 ~ 11539834 (-)
LOC122358562 NA non-coding upstream 25569 11552253 ~ 11552751 (-)
G105716 jam3a,LOC107662760,LOC107699899,LOC107713445,LOC107597526 non-coding upstream 35533 11562217 ~ 11564348 (-)
G105701 vps26b,LOC107713444,LOC107582573,LOC107748589,LOC107699898,LOC106613018 non-coding upstream 42048 11568732 ~ 11571176 (-)
LOC122358516 LOC107741316,LOC107657036 non-coding upstream 104605 11631289 ~ 11631878 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other downstream 19689 11073281 ~ 11506177 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 168313 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 183750 11326512 ~ 11342116 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other downstream 221056 11302230 ~ 11304810 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 862278 10658934 ~ 10663588 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 316082 11842766 ~ 11855895 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other upstream 503964 12030648 ~ 12033594 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 753607 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1927798 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 2217871 13744555 ~ 13751057 (-)

Expression


Co-expression Network