ncam1b (LOC107748595)


Basic Information

Item Value
gene id ncam1b
gene name LOC107748595
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10773572 ~ 10855184 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259257.1
GTTTAGTTTCCAGGTTGGGTTCAGTGCATTATTTGATCATATCGCTGTCTTTCCTCAGAGGCTCCGCTGATTGGGCGGATTAATTCGCGTGCATCTTGAAGCGGCGTGTGCACGCGCTCTCGCCTCTCACCGTCTCAGCGCGCGACATATGGGCAAGCGAATTTAAACCGCAACAATATCGATACAGTCCAACGATCAGGATCCTCGTCCGCGTTCGCATCCCGCGCGGAAAACTTCGCGGGAACTTCGCAGGCACGATTTACGGATTTTACGAATTCTTCATCTCGAGCACGGGAGACGACAATAAACAGCAAACGCGCTGCGTTTCATAAAAGGGATTGCAATGTTTCCGACCAAGGCGATGATCTTGGTGCTTCTTTTCTTTGGCTGCGCAGttTCTCTGCAGGTCGATATTACACCTGCGCAGGGTGAGATCAGTGTTGGAGAGTCTCGATTCTTTTTGTGTGAAGTTATCGGCGGGGCCAAGGAAATCGATTGGTTTGCTCCAACCGGTGAAAAGATTGAGCCAGGCAGACTGGATATCAGCGTGATTCGCAATGACGAGACTTCCTCCACTCTCACCATCTATAACGCAAAGGTTGACAATGCCGGCACATACAAATGTATGGCCAGCAGTGGTGATCGGGAAGCTGAGGCCACCGTCAATCTGAAGATATACCAAAAAATCACCTTCACAAACGTCCCATCACCTCAAGAGTACGAAGGGGACAATGCCATTATAGTGTGTGACGTCATAAGTTCACCTCCGCCCACCGTCCTCTGGAAATACAAAGGTGCAAAGATCCAGTTTGAAAAAGATGTCCGTTTCAGGACTTTGAATAACAACCATCTCCAAATCCGAGGCATCAGAAAGACAGACGAGGGTGTCTACACTTGTGAGGGCCGCATTAAAGCCCGTGGGGAGGTTGACTTCCGGAGCATTAAAGTGGTTGTTAATGtCCTGCCCACTATACGAATCCGTCAAGCGGAAACGAACGCCACCGCTGACATGGGCTTCTCAACACTGCTGGCCTGTGATGCTGACGGATTTCCTGAGCCGATGGTGACCTGGGCACGgAACGATGTTCCACTGAAGAATGGCGATAAATACAGCTTCAATGAAGACGGCTCTGAGATGACAATACTAGATGTGACAAAGCTGGACGAGGGGGATTAcacatgcattgctaagaacaaAGCTGGGGAGAGCGAACAAGAACTTAGCCTTAAAGTCTTTGTGCAACCCAAAATCACATATCTAGAAAGCCAGACCACCACAGAAATGGACGAGCAGGTCACGTTAACATGTGAGGCCACCGGAGACCCCACGCCCACCATCACATGGAGCTTCGGCACCAGGGTCTTCACCGAGGGAGAGCAGAGTCCTGATGGTGATGTGTTGGTCCGCAGTGACGCCCGCGTGTCTTCTCTCACCCTGAAGTACGCTCAGTACACCGACGCCGGCGAGTATCTCTGCACCGCCCGCAATGCCATCGGAGAAACGGCGCAGCCCGTGTATCTGGAAGTGCGCTACGCCCCGAAAATCCTGGGCTCAGTAACGGTGTACACGTGGGAGGGCAACCCGGCCAACATCAGCTGTGAAGTGCTGGCTCACCCCAGCGATGTGTCGATTACGTGGCAGCGAGACGGTTTCCAGCTGCCTAACGCTAACACCTCCAATATCAAGATCTACAACACGCCTTCAGCCAGCTACCTGGAGGTCAATCCAGAGTCTCAGAGCGACTTTGGCAACTACAACTGTTCTGCCTCCAATGAGATCGGGACCGAATCCAAAGAGTTCATCGTGATCCCAGCTGATGTGCCCTCGGCGCCGTCCATCACTCAAGTGCAGCCGTACTCCAGCACGGCTCAGGTGCTTTTCGAGGAGCCCGAGTCCACTGGAGGAGTTCCTGTGCTCAAGTACCGAGCCGAGTGGAGAGCCGTGGGCCGAGGGAAATGGGCGCAGCGAGTCTACGAGGTGAAAGACGGACTGAGTTCAGTCACGGTCACCGGCCTAAAACCCGAAACCGATTACGAAGTCAAGATGTCTGCCATCAACGGCAAGGGCGAAGGCGACAGCAGCCAGTCACTGGTCTTCAAAACCGAGCATGTCCGAGAACCAAGTCCTCCTATACTAGAGGGCACCCTACAACCCAAAGGCAATTCTCTTAAAGTGAAATGGACCAAACAAGACGACGGAGGGTCACCAATCACCCATTATTTGGTCAGATACAAAGCTAGGGAAGACTCTGACTGGAAGCCCGAGATCCGTCTGCCCAACGTGAGCGAGTACGTAATGCTGATCGGACTGGAGTGGGACACCGAGTATGACGTGTTTGTGGTGGCAGAGAATCAGCAAGGCAAGTCCAAGCCCGGCACTCTGACCTTCAGAACTTCATCGGAGCCTGCAGCAACCACAGACTCCATGGAAGACGGGCCGGGCCTGAACACTGGAGTAATTGTTGGCATTCTCATCCTGGTGTGTGTGCTGCTCTTGCTGATCGTGGACGCCACCTGCTGCTTCCTCAACAAGTGTGGCATCCTCATGTGCATCTGCGGTAAACCCGGGCAAGGCACCAAGGGCAAAGACATAGAGACAGGCAAAGCTGCCTTTGTTCAAGATGTGTCTAAAGAGCCCATTGTAGAAGTGAGGACAGAGGAAGAGGCCACAGCCAATCACGACGCAGAAGGCCATCCTGAGCCCAATGAGACCACGCCGCTGACCGAACCAGAGCAAGTGACGGAAACTGCCGCCGCGGTGGTGGACTTGCCTCTCTCTGTGCCCACTAACTCAGACACGGTCACTGACACCTTTGACCTTAGCCAGAGCAGCCCAGTTAGCGAGAGCACCACCCTCACCTCCAGCATCACGGCGCCTCCCTCTGACCCTCTTAACCCCGCCCGAACGACTCCGCCCAACAGCAGCACGCCCAAATCTCACACCAAACCCTCCATCACGTCCACCCCGTCTCCCGACCCGGCTAGCGTTACTCTCCTGGTAGACCTGGGTGATTCCCCAGAGCCACGAGCTGAGGTTCCTCCGACGGTCCCTTCAGAAGAACCTTCCCCTCCCAGCGTCGTCCAACCAGATGCTATAAACTCAAAAGTCACAGAAAACGAATTTGAGTCGCCCGAGTCTCATGCCGCTTTAAATCCCATCAGCCCACAGGGCAGCGCCGCGATCCCCTTAGTGAATCATGAACATGTGATTGATGGAGAGCTCCCACTGGCTCCAGACACAGACGTCCCTCGGGATGGGTCACATGCTGTGGGGACAGCTGGCTCCAGTGGCCCATCTGTTCCAGCGCAGGACGAGAAAACAGTGGATGAGGAGAAGAGCACGAGTGAGCTGAAGAAAGCTGCGCGGGACGCTGGAGCAGAACCCAACGCCGTCACGCAAACAAACGCCACCGAAAGCAAAGCGTGAGGAGAGTGGAAACGTGTTTGTTTAACAGTGCCCTTAATGAATTTTCTGAACAAAATGGTACATCTGCAGACAGACGTTTTCATTTCTGATGTATGtacgcatttttttttcttttctttttgttaatttgATCAAGTTTCTGTATCACAGTCAAAACTTCATACACTTCAGAGATATCCTTACAGAGCTTCTCGTGTTTCTCTGTACATTCTGTCGTTTTTAAAGCAGGGCATCAAGTTATTCAGGAGAATGATTTATTCGAACCATTTATTTACAAAGtacattgttaaaatgtaaatgacttCTCCTATTTTTTTATCTTGAGTGTTTGAGGGCTAGGTTCGACGTGTTgttagttttgtgttttattatattttatcatgttttatttacacttgCCTGTTGGATGATAACTCGTTATGGCGGTTAcgtaaagacaaaaaaatatcgTAAGATATTTTAACATGCTGAATGTCTGATAAAGATTTCAAATAAGCCATTTGGTTCGCTACTGAAGTCTTCATTAGATGCGTTTTTACAATTATCGTGCGTTTCTAATATTCGGGATTTATACGTTAAACCATTCTTCCAACGTGCTCCTAAAGCATTGACTTACGCTAAAATATCTGCTCATTTTTATACCTTGTACCTCTGGAAATGTTTCGCACCGTCACCTGCAAGCTTGTGCACTGTGATCgtgttaccttttatttttttttttcttcgagAAAATTTGCATAGTTTTTGCAGCAACTGCCGATTGTCCTTTTATAACGCGACGTATGTTAACGGTCCTGCGTGAAAGTGGACTGATGGGACGCGTGGCTCTGAGAAGAGTTCTTATATCATCACTCATTGCATGACTGTCTGCTTGCCCGTGTCTGACGTTAAAACAAAGACTGGCCTGAACTGTTTACGTATCGGTTTGAGGCTGTCCGGTTGGAGGAATAGTGAAGATTGTCggttattttgattttaatgctTTCTATAATGtttgagagaatgagagagggTTTCGTTTTCCCGTTGTACACAAGTTGTTCAGTTGTTCACTGCCAGATTGCCCCAAAACTGTAAATTGTTTCATGTATTTGGGGACTTGACCCATGAAATAGCAGTATAATGGGTGAGCTTTACTATGATAAGCAAAGAACATGTTGTAAATTGTGTTGCtctaacacattttaattaaactcattAAAACATGAA

Function

NR:

description
neural cell adhesion molecule 1-like isoform X6

GO:

id name namespace
GO:0007411 axon guidance biological_process
GO:0007155 cell adhesion biological_process
GO:0016020 membrane cellular_component

KEGG:

id description
K06491 NCAM, CD56; neural cell adhesion molecule

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259257.1 True 4636 mRNA 0.49 20 10773572 10855184

Neighbor

gene id symbol gene type direction distance location
zbtb16b zbtb16b,LOC107713452,LOC107582577,LOC107701406,LOC107597519,LOC107699906,LOC108435307,LOC107748597 coding downstream 1434 10721967 ~ 10772138 (-)
LOC122358615 LOC107713453,LOC107701410,LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107708768,LOC107582657 coding downstream 50074 10712618 ~ 10723498 (-)
LOC122359108 LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107713453,LOC107701410,LOC107708768 coding downstream 65516 10707076 ~ 10708056 (-)
LOC122359114 NA coding downstream 69124 10699729 ~ 10704448 (-)
btr16 NA coding downstream 74486 10694920 ~ 10699086 (-)
arhgap32a arhgap32a,LOC107713447,LOC107662764,LOC107582574,LOC107699902,LOC107597520 coding upstream 190767 11045951 ~ 11072510 (-)
LOC122359110 LOC107717180,LOC107713465,LOC107597510,LOC107582585 coding upstream 324152 11179336 ~ 11185100 (-)
LOC122358618 LOC107713430,LOC107701402,LOC107659945,LOC107582659,LOC107717182,LOC107597593 coding upstream 329966 11185150 ~ 11187283 (-)
si:ch211-213d14.1 LOC107701402,LOC107659945,LOC107717182,LOC107582659,LOC107713430,LOC107597593 coding upstream 332235 11187419 ~ 11192049 (-)
LOC122358470 NA coding upstream 677257 11532441 ~ 11533631 (-)
G105497 NA non-coding downstream 261309 10475572 ~ 10512263 (-)
G105462 NA non-coding downstream 304135 10466964 ~ 10469437 (-)
G105461 NA non-coding downstream 311503 10461741 ~ 10462069 (-)
G105440 NA non-coding downstream 366287 10406951 ~ 10407285 (-)
G105439 NA non-coding downstream 379240 10394095 ~ 10394332 (-)
G105653 NA non-coding upstream 113985 10969169 ~ 11028778 (-)
G105674 pou2af1,LOC107582583,LOC107713464,LOC107717181 non-coding upstream 313937 11169121 ~ 11171739 (-)
G105694 NA non-coding upstream 449799 11304983 ~ 11306514 (-)
LOC122359088 NA non-coding upstream 470091 11325275 ~ 11325997 (-)
LOC122358449 NA non-coding upstream 566670 11421854 ~ 11425407 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 109984 10658934 ~ 10663588 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other downstream 259510 10512631 ~ 10514062 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 976649 9763871 ~ 9796923 (-)
G105059 NA other downstream 1217785 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 1336775 9434426 ~ 9436797 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 218097 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 447046 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 471328 11326512 ~ 11342116 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other upstream 498462 11353646 ~ 11357553 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 987582 11842766 ~ 11855895 (-)

Expression


Co-expression Network