LOC122359114


Basic Information

Item Value
gene id LOC122359114
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10699729 ~ 10704448 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259290.1
CTGTTATATAGGCGCTGCTCTTCCTGTAAAGGTTTCAGTGAAAATGAAACTAAAGAAGTGgctctgaaacatttttttctcttggaACAACAAGATTTTTATTTCGGCAGTCTGAGATCACAGCTGACACTCACAGCCTCAAGAAGAGAAAAGCAATGGCAGAATCTTTATCAAAACCAGCTGAGACCAGGAGACAAAGTCACCCTTCGACGACTCTTTCAGAGGAGCTTAAGTGCTCGATCTGTCTGGATGTGTTCACTGATCCAGTCAGCACTCCATGTGGACACAACTTCTGTAAGAGCTGCCTGAACCAGTGCTGGAACAACAGTCAGACCTACAACTGTCCGTTCTGTAAAGAAGCGTTCAGTAAAAGACCAGAGCTGAAGATCAACACTGCTCTCAGACAGGTTGTGCAGCTCTTTAAGGAAAAGCCTGGTCTGACTAAACCTGAGGTTCTCTGTGACATCTGTGATGATATAAAGCTGAAAGCCTTGAAGATGTGTCTGGTGTGTCAAAATTATTACTGTCAAACTCACCTGGAGCCTCATCACAGAGTCCaaaatttaaagaaacacaaactGATCGATCCTGTTGAGAATCGTGAGGACTATATATGTCAGAAACACGAGAAACCTCTGGAGCTGTTCTGCAGAGATGATCAGACGTGTGTGTGCTTGCTCTGTGCTGTAACAAACCACAGGAATCATAACACTGTAGCTGTAGAAGAGGAGAGCGGAGAGAGAAGGCCTCAGCTGATGAAGATGCAGACGGACGTGCGGCGGATGATCCCGgacagaataaagaaaatacaaagcATCAAGCAATTAGCAAAACTCAGAAAAGTgaGAATCATCAGAGAGAAAGCAGAGAGTATGGAGCTCTTCACTAATCTGCTGCGCTGCATCGAGAGATGTCAGTCTGAGCTGCTGGAGATGATGGAGCAGAAGCAGAAAGCAGCAGAGAAGCAGGCTGAGGAGCTGATTAAAGAGCTGGAGCAGGAGATCACTGAGCTGAAGAGGAGAGACACTGAGCTGGAGCAGCTCTCACACACTGAGGATCACCTGCACCTCCTACAGATTTACCCATCGCTGAGCAGACCTCCACACACCAGCAGCTCCACTGACATCAGTTTTAGTGACACTCAGCTCAGTGTGGCGACCCTGAGGAAAACTCTGATACAGCTGCAGGAGACTCTACATGAGAAACTCAGTAAAACTGTACAACTGAAGAGGATGCAACAGCACGCAGTGAATGTGACTCTTGATCCTGATACAGCTAATGCAAAACTCATCCTGTCTGATGATGGAAAACAAGTCACATGTGGAGACATTAAGCTTAAAATCCCAGACAACCCAAAGCGGTTTGACACTTGTTGCTCTGTCCTGGCGAAAGAAGGTTTCAGCTCAggaagattttattttgaggtgCAGGTAAAGAGAAAGTCAGAGTGGGATTTAGGAGTGGTCAGAGAATTCTTTAACAGGAAGGGAATGATCACAGCAGGTCCTGAGTTTGGTCACTGGATTATAGTTCTGAGAGATGAGAATCACTATATGGCTTGTGAGTCTAttcctgtctctctgtctctgagaGTGAAGCCTCAGgttgtgggtgtgtttgtggattACGAGGAGGGTCTGGTCTCCTTTTATGATGTGGAATCTAAATCTCATATTTATTCTTTCACTGGTCTGTCTTTCACTGAGAAACTCTTCCCATACTTTAGCCCCGGTGATAAAGACAAAGGTAAAACTGCAGCACCACTGATCATCTCACAtgtcaaacaaaataaatgaatttacaccatgaatagaaatataaaaataatgtagttTTAGTGCTACGAATACTTGCTGTTGTTAAATgatgaaatgtcttttttttcatttggaaagGTTTTCCAgtgtacatttttcatgttttctccAAAGCTTCAAAAATATTTCCTCAAGCTATCTGCTTTTTGTTGCTGTATCTGTGAAAGTGAAATTAGTTCTAAAGTCCTCTGTTCACTAGAAATGAACGGACCATCATGGGAAAAACAGGAAGGACATTTTAACAGGCAGCATATTTAATATGATGAGATCTTCATGTACGGTCTTAATATTCTtgaaatttctttaaataaacgCATTTTATTTCACCTGGTAATAAA

Function

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259290.1 True 2155 mRNA 0.43 8 10699729 10704448

Neighbor

gene id symbol gene type direction distance location
btr16 NA coding downstream 643 10694920 ~ 10699086 (-)
LOC122359098 NA coding downstream 4729 10689979 ~ 10695000 (-)
LOC122359100 NA coding downstream 10467 10683443 ~ 10689262 (-)
tmprss5 tmprss5,LOC107713421,LOC107717179,LOC107597570 coding downstream 18485 10675380 ~ 10681244 (-)
pih1d2 pih1d2,LOC107701408,LOC107577555,LOC107699912,LOC107597596 coding downstream 24992 10672615 ~ 10674737 (-)
LOC122359108 LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107713453,LOC107701410,LOC107708768 coding upstream 2628 10707076 ~ 10708056 (-)
LOC122358615 LOC107713453,LOC107701410,LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107708768,LOC107582657 coding upstream 8170 10712618 ~ 10723498 (-)
zbtb16b zbtb16b,LOC107713452,LOC107582577,LOC107701406,LOC107597519,LOC107699906,LOC108435307,LOC107748597 coding upstream 17519 10721967 ~ 10772138 (-)
ncam1b LOC107748595 coding upstream 69124 10773572 ~ 10855184 (-)
arhgap32a arhgap32a,LOC107713447,LOC107662764,LOC107582574,LOC107699902,LOC107597520 coding upstream 341503 11045951 ~ 11072510 (-)
G105497 NA non-coding downstream 187466 10475572 ~ 10512263 (-)
G105462 NA non-coding downstream 230292 10466964 ~ 10469437 (-)
G105461 NA non-coding downstream 237660 10461741 ~ 10462069 (-)
G105440 NA non-coding downstream 292444 10406951 ~ 10407285 (-)
G105439 NA non-coding downstream 305397 10394095 ~ 10394332 (-)
G105653 NA non-coding upstream 264721 10969169 ~ 11028778 (-)
G105674 pou2af1,LOC107582583,LOC107713464,LOC107717181 non-coding upstream 464673 11169121 ~ 11171739 (-)
G105694 NA non-coding upstream 600535 11304983 ~ 11306514 (-)
LOC122359088 NA non-coding upstream 620827 11325275 ~ 11325997 (-)
LOC122358449 NA non-coding upstream 717406 11421854 ~ 11425407 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 36141 10658934 ~ 10663588 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other downstream 185667 10512631 ~ 10514062 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 902806 9763871 ~ 9796923 (-)
G105059 NA other downstream 1143942 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 1262932 9434426 ~ 9436797 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 368833 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 597782 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 622064 11326512 ~ 11342116 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other upstream 649198 11353646 ~ 11357553 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 1138318 11842766 ~ 11855895 (-)

Expression


Co-expression Network