LOC122359100


Basic Information

Item Value
gene id LOC122359100
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10683443 ~ 10689262 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259265.1
TGTACTTTGTCCCCGAACAGCATGTTTGATGGCTAAGAGTGGATAGAATTTTCATATTCACGTTTAATGGTAGTgtttcatgaaatattttttgtgtttactgtgaacagatttaaaaagtgaaatttggAGCGATGGCGGAATCTTCAGCAGCACAGAAACCATGGAGGAGGGGGAGCCTGGATGCACCACCATTATCTCTTTCAGAGGAGCTTAAGTGCTCGATCTGTCTGGATGTGTTCACTGATCCAGTCAGCACTCCATGTGGACACAACTTCTGTAAGAGCTGCCTGAACCAGTGCTGGAACAACAGTCAGACCTACAACTGTCCATTCTGTAAAGAAGCGTTCAGTAAAAGACCAGAGCTGAAGATCAACACTGCTCTCAGACAGGTCGTGCAGCTCTTTAAGGAAAAGCCTGGTGAGAGAAAACCAGTGGTTCTCTGTGACATCTGTGACGATATAAAGCTGAAAGCCTTGAAGATGTGTCTGGTGTGTCAGAGCTCTTACTGTCAAACTCACCTGGAGCCTCATCACAGAATcacacatttaaagaaacacaaactGATCGATCCTGTTGAGAATCGTGAGGACTATATATGTCAGAAACATGAGAAACCTCTGGAGCTGTTCTGCAGAGAtgatcagatgtgtgtgtgcttgctttGCGCTGCAACAGACCACATGAATCATAACACTGTAGCTGTAGAAGAGGAGAGCGGAGACAGGAAGCCTAAGCTGCTAAATATGCAGTCAGACGTGCAGCGGCTGATCCAGGACAGGATGAAGAGAATACAAGACATCAGGCACTCAGCAAAACTCAAAAAAGAatcatcagagagagagaaagcagagaGTATGGAGCTCTTCACTGATCTGCTGCGCTGCATCGAGAGATGTCAGTCTGAGCTGCTGGAGATGATGGAGCAGAAGCAGAAAGCAGCAGAGAAGCAGGCTGAGGAGCTGATTAAAGAGCTGGAGCAGGAGATCACTGAGCTGAAGAGGAGAGACACTGAGCTGGAGCAGCTCTCACACACTGAGGATCACCTGCACCTCCTACAGATTTACCCATCGCTGAGCAGACCTCCACACACCAGCAGCTCCACTGACATCAGTTTTAGGGACACTCAGATGAGCGTGGAGCCTCTGAGGAAAGCAATGATTCAGCTACAGGAGACTTTAAATGAGAAACTCAGTAAAATCGTAGAACTGAAGAGGATGCAGGAACATGCAGTGAATGTGACTCTTGATCCTGATACAGCTAATCCAAAACTCATCCTGTCTGATGATGGAAAACAAGTCACATGTGGAGACATTCAGCTTAAAATCCCAGACAACCCCAAGCGGTTTGACACTTGTTGCTCTGTCCTGGCGAAAGAAGGTTTCAGCTCAggaagattttattttgaggttCAGGTAAAAGGAAAGACCAACTGGGATTTAGGAGTGGTCAGAGAATCCATTAACAGGAAAGGTATAATCACAGTTGCTCCAGAAGATGGATACTGGATTATAGTTCTGAGAGATGGGAATCAATACAGGGCTCGTGAGGCTCctcctgtctctctgtctctgagaGTGAAGCCTCAGgttgtgggtgtgtttgtggattACGAGGAGGGTCTGGTCTCCTTTTATGATGTGAAATCTAGGTCCAAAATATATTCTTTCACTGGTCAGTCTTTCACTGAGAAACTCTTCCCATACTTTAGCCCTGGTCATAAAAAAGAAGGTAGAATTTCAGGGCCACTTATTATCTCATAAGTCagatataataaatcatttattgatGATAAAGGCAGTACTCATACATGGTATACAAtggcaaaacacaaaaactctGTCAGTGTCCGAATATTTCCAGACTagactgtatgtatgtgtaatatatattgcattatgaATACTTGTGCAGTAAGATGAGttgtgtaatatattttctttgagggatctgaaatatttttctttttctttttttccgcGCTGTTTgtgaatcaaaaataaaatccatacATGTAGggatttttcaaattaaaattaagattaaaagaTTATTGCATCTATACCATGAAGTGAACCACATAATTATTTTGAaccttataataataatgaatgttgAGTAAGCATATAGATTCTGTTCAacattgcatgttttttatGTGAAAAGAAATATCTTTGATATTTGTTGTGAAGAAGCCTCAAGAAAAGAACAGCAATGGCAGAATCTCTATCAAAATCACCAAAACCAACCAAAGGCAGGATAGACGTTAAAGACCACCTTCAAATTAGTAAGTAAAGAAATTTAAGTGGTTTTTCCTTAAAATTTAAGTAAACTTACATTTAAGTGATATATTGTGACGAGCATCCTGAAGGAtcatcagcgtcgccctggaaACACACAAGTAGCACATGGCCACGCCTCCAATTGGCTGATCAGTTGCAGCTACCAGCCATCAGCCCGCTACATGTGACCAATCAGCCCCACCTCCCCACGGCATGGACCCACTGCAGCACAGAGAAGGAAAAGAAGAAGCACCAGAGCACCGACTCACCTCGTCTCCTGCACCAGTTCACGTATTGTTTcacattttgtcaataaaatcCACTCTCCGGGGATTTTCACTGAGCTCTGCTTGTCGTGTGATTCTTCATCCTGttacactggtggagaatgtggGCAAGAGTGTGAAGAATCACCGGCAAGTGATCTCTCCCCACACcaattttttgtctcttttttgtttttttgaattcCACAAATCGGCGGCTTGCCTTTTTCCCCCTCGAAATGGAGGAAGTGTTGCAGAGACTCACCAAGGTTAGCATCCGCCAACAGCAAATTGTGGAGCATCTAGCCACCCGCCAGGGTGAGTCGGAACAAGAGCTTGTAGCCCTTAGAACAGCAGCCGCCCAACAGACTGGAGGCCGTGGAGTTGACGGATGCTGCCCAACACCCGGAACCGGGGGAAAAATGGCCGCCGTTTTCCCGGAGGGTGGTCCAGGAGCGATGCGCGCTGGAGAGCACCCAGCGACCAATGAGCAGGCTGGCGGTTCCCTCTGTGCCCATACCCACGGAGGACCCAACACCACCGGCAAGAACATGGTAGGCAGGCTGCAGTGTACATTGTGAGCTCCCAGCAGGAGCCCGGAGGCGAACGTCAAGGTCAACGGGAAACCCTTCCGCACCCTCCTTTACTCCGTTAGTGTCGTAAGCCTGGTTCGTCCCAACGTCATTGTTCCATGGGGTGAGAGCAAAATTTACATGCCCATAAGCTGTGTGCCTGAAGACACACGACAAGTGCCAGACCAAAGGGTGAATATATCGGCGACGACTGGGACATGGCCTGTGGAAGTAAAGGACCTGCCCGTCCCCGTTCTTCTTGGAAGGGATCGGCAGCTCTTAGACAGGTTGTGCAGCTCTTTAAGGAAAAGTCTGATCAGACTATATCTGAGGTTCTCTGTGACATCTGTGATGATATAAAGCTGAAAGCCTTGAAGATGTGTCTGGTGTGTCAGAGCTCTTACTGTCAAACTCACCTGGAGCCTCATCACAGAgtcacatttaaagaaacacaaactGATTGATCCTGTTGAGAATCTTGAGAAATACATCTGTCAGAAACATACCTTTGGAGCTGTTCTGCAGAGATGATCagacatgtgtgtgtttgctctaTGCTTTAACAAACCCCAGGAATTGAGAAGAGCGAAGAGAGAAAGGTAAA

Function

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259265.1 True 3724 mRNA 0.45 7 10683443 10689262

Neighbor

gene id symbol gene type direction distance location
tmprss5 tmprss5,LOC107713421,LOC107717179,LOC107597570 coding downstream 2199 10675380 ~ 10681244 (-)
pih1d2 pih1d2,LOC107701408,LOC107577555,LOC107699912,LOC107597596 coding downstream 8706 10672615 ~ 10674737 (-)
arcn1b arcn1b,LOC107713460,LOC107701413,LOC107582579,LOC107597516,LOC107659917,LOC107717188 coding downstream 25693 10652198 ~ 10657750 (-)
phldb1b phldb1,LOC107701414,LOC107659918,LOC107717178 coding downstream 45494 10582203 ~ 10637949 (-)
LOC122358984 LOC107713431,LOC107701403,LOC107728777,LOC107597591,LOC100002059,LOC107582660,LOC107659940 coding downstream 253840 10420254 ~ 10429603 (-)
LOC122359098 NA coding upstream 717 10689979 ~ 10695000 (-)
btr16 NA coding upstream 5658 10694920 ~ 10699086 (-)
LOC122359114 NA coding upstream 10467 10699729 ~ 10704448 (-)
LOC122359108 LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107713453,LOC107701410,LOC107708768 coding upstream 17814 10707076 ~ 10708056 (-)
LOC122358615 LOC107713453,LOC107701410,LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107708768,LOC107582657 coding upstream 23356 10712618 ~ 10723498 (-)
G105497 NA non-coding downstream 171180 10475572 ~ 10512263 (-)
G105462 NA non-coding downstream 214006 10466964 ~ 10469437 (-)
G105461 NA non-coding downstream 221374 10461741 ~ 10462069 (-)
G105440 NA non-coding downstream 276158 10406951 ~ 10407285 (-)
G105439 NA non-coding downstream 289111 10394095 ~ 10394332 (-)
G105653 NA non-coding upstream 279907 10969169 ~ 11028778 (-)
G105674 pou2af1,LOC107582583,LOC107713464,LOC107717181 non-coding upstream 479859 11169121 ~ 11171739 (-)
G105694 NA non-coding upstream 615721 11304983 ~ 11306514 (-)
LOC122359088 NA non-coding upstream 636013 11325275 ~ 11325997 (-)
LOC122358449 NA non-coding upstream 732592 11421854 ~ 11425407 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 19855 10658934 ~ 10663588 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other downstream 169381 10512631 ~ 10514062 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 886520 9763871 ~ 9796923 (-)
G105059 NA other downstream 1127656 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 1246646 9434426 ~ 9436797 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 384019 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 612968 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 637250 11326512 ~ 11342116 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other upstream 664384 11353646 ~ 11357553 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 1153504 11842766 ~ 11855895 (-)

Expression


Co-expression Network