G105653


Basic Information

Item Value
gene id G105653
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10969169 ~ 11028778 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU156047
TGCTTTTTGAACATTAATACCTCTTTTTATTAAGACAGTACTGCTccatttctgtaaaaatgtattttcatggtCAAATACAAAGTGTAATCGGGAACATGTAAATAACTTTAATTACACAGGAATACAAACTAcagagatgagacaaaaatatcTGACATAAAACCTATGAAAACAATGAAGAATGGCTCTGGTGGTACAGGTTGtctaaaaatggaaaatgaattGTAAATGTAAGCACTAAGATTCACttcttagatttatttattttttttaaataaacctatCATCTGCTGTGTCCTAACTATACAAAGTAATATGAACATTTACACAGTGCACAGCATCTGAAGCGCAGATAAAACATGTCGAACATGCTCTATtctgcaggattttttttttttttgataataactTAAAGTCTTTTCAGATATGGGGCATCACTTTTGCATTCTACCTGAGAtgcaaaaaatgaattcatagACAGACCTGAGACAGGGCAGAATCAAACCTACGCTGAaggtatgtttgtgtgtgcatgttttcttttttttttctccaggtttgGGCAGTTTTAGATCACTTACCATTTCacttgtaaatattaaaataaacgttagaaaagaaagtaaaagagTGATCTGGCTGTATGGGTTGGTGGATCCACTCTGGAAACCCTCACCATGTTATGACTCTTTGTAGCCCTCACTCCATATTTGACATAAGTTGGAAATAGCTTCATGCCATTACAATTACAGTATGATAATTGAgagaaattatataatatacaattataaatgctttttttaaaattcacatgCTTGGAATGTCAATCGGatgcacattttctgtatgtacactacagttcaaaagtttggggttgataagattttttgttgatgtttttaaaataagtctctTTTGTTCACCAAAGttgcattcatttgaataaataaaattaatgtattcctttgatggcaaagctgaattttcagcattcttcagtgtcacatgatccttcagaaactattgtaatatgctgatttggtgctcaagaaacatttcttattataatcACCGTTGTAAACAGCTGTgatgcttaacatttttgtataaactATGAtacgtattttaaaatattcagtataccgttaaaataaataacagcatttattttaaatagattttttctaACGTTATATACATCATTACTGTCATATCTGtggaataaaagtattaattcataaaaaaataataataaatcttttcaCCCCcaacttttgaatagtaatgTATGAAATTGGGgccaacgtttttttttttgtttttttttttttt

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156047 True 1335 lncRNA 0.30 2 10969169 11028778

Neighbor

gene id symbol gene type direction distance location
ncam1b LOC107748595 coding downstream 113985 10773572 ~ 10855184 (-)
zbtb16b zbtb16b,LOC107713452,LOC107582577,LOC107701406,LOC107597519,LOC107699906,LOC108435307,LOC107748597 coding downstream 197031 10721967 ~ 10772138 (-)
LOC122358615 LOC107713453,LOC107701410,LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107708768,LOC107582657 coding downstream 245671 10712618 ~ 10723498 (-)
LOC122359108 LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107713453,LOC107701410,LOC107708768 coding downstream 261113 10707076 ~ 10708056 (-)
LOC122359114 NA coding downstream 264721 10699729 ~ 10704448 (-)
arhgap32a arhgap32a,LOC107713447,LOC107662764,LOC107582574,LOC107699902,LOC107597520 coding upstream 17173 11045951 ~ 11072510 (-)
LOC122359110 LOC107717180,LOC107713465,LOC107597510,LOC107582585 coding upstream 150558 11179336 ~ 11185100 (-)
LOC122358618 LOC107713430,LOC107701402,LOC107659945,LOC107582659,LOC107717182,LOC107597593 coding upstream 156372 11185150 ~ 11187283 (-)
si:ch211-213d14.1 LOC107701402,LOC107659945,LOC107717182,LOC107582659,LOC107713430,LOC107597593 coding upstream 158641 11187419 ~ 11192049 (-)
LOC122358470 NA coding upstream 503663 11532441 ~ 11533631 (-)
G105497 NA non-coding downstream 456906 10475572 ~ 10512263 (-)
G105462 NA non-coding downstream 499732 10466964 ~ 10469437 (-)
G105461 NA non-coding downstream 507100 10461741 ~ 10462069 (-)
G105440 NA non-coding downstream 561884 10406951 ~ 10407285 (-)
G105439 NA non-coding downstream 574837 10394095 ~ 10394332 (-)
G105674 pou2af1,LOC107582583,LOC107713464,LOC107717181 non-coding upstream 140343 11169121 ~ 11171739 (-)
G105694 NA non-coding upstream 276205 11304983 ~ 11306514 (-)
LOC122359088 NA non-coding upstream 296497 11325275 ~ 11325997 (-)
LOC122358449 NA non-coding upstream 393076 11421854 ~ 11425407 (-)
LOC122358535 NA non-coding upstream 483868 11512646 ~ 11513531 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 305581 10658934 ~ 10663588 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other downstream 455107 10512631 ~ 10514062 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 1172246 9763871 ~ 9796923 (-)
G105059 NA other downstream 1413382 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 1532372 9434426 ~ 9436797 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 44503 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 273452 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 297734 11326512 ~ 11342116 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other upstream 324868 11353646 ~ 11357553 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 813988 11842766 ~ 11855895 (-)

Expression


Co-expression Network