LOC122358615 (LOC107713453,LOC107701410,LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107708768,LOC107582657)


Basic Information

Item Value
gene id LOC122358615
gene name LOC107713453,LOC107701410,LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107708768,LOC107582657
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10712618 ~ 10723498 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258496.1
ATGAAACGCGTTCAAATGAACATAACTGGAAACAGCAATTTGAGCagcacatttaatttgaaagcaATTAATGAGAAACCTTTGGTGGTGCAAGTACTGGTGGGTATTCTTCTCTATGTGAATGGACTGATGATTTTCACCTTTCTGAAGAAAGAGACCTTCAGGGAAACACGCTACATTCTGTTTGCTCAGACTCTTTTTGTTGACTCTGCTCTTATGCTGATGACTGATTTAACCCTCATGGGGGCATTTTACCAGTTCCCTGTGCCTATAATTCCTTGTTATATCTTCTGCACGCTTATGTTTTTGCTCTATGTTTGCTCACCAATGACTCTTGTAGCCATGTGTTTGGAGCGCTATGTAGCCATATGTATGCCTTTAAGACATTCCAGCATCTCCACCCCTAAAAACACCTTCATTGTGCTTCTTGTCATTTGGAGTGTAAGTTTTGTTATtccattgtttgttttaatagcCTCTTTTATTTATATCCCTCCTGGTGTCTTTCACCAATATGTTGTGTGTAGTGTGGAGGTCATGTTACAGGTAAAATGGCTGGCAGACATGAGAGCGACAAGTCTGCAGCTATTACTCATCATGAtgttgtgtattattgtgtCTACTTACTTCAAGATTATGTTGGCAGCCAAATCGGCCTCCTCTGAGAGGAAGAAATCCACAAATAAGGGTCTCAAAACTGTTATTCTCCATGGTGTTCAGCTTCTTCTGTCTATGATGCAGCTTATAACCCCTTATATAGAAATGCCTTTATGGAAATTAGATTTTATGCTATTTGTGAATGTAAGATATtcaaatttcattttgtttttgatcttGCCTCGTTGTCTGAGTCCCTTAGTTTACGGGTTACGGGACAAAAAGTTTTATAATGCTCTTAAATATTATGCTTTTTGTGGCATTTTGGTTTGTAATAAGCACAAAATAAGAGGGCAATCATTTAGAGGTGTAGTAAGCATTACCATAAAATTAAACCTCAAAATATGTAGTGCATGTAGTCCTGTGGACGatgacaccagccccactctggatccagaacccagcccagCATCTCACCGTGATGCAGAGCAACAGCCTGAGCCCACGGATCACAGATTTTCAGTTTGTTGCGACCAATGA

Function

NR:

description
PREDICTED: olfactory receptor 51G2-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258496.1 True 1137 mRNA 0.40 4 10712618 10723498

Neighbor

gene id symbol gene type direction distance location
LOC122359108 LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107713453,LOC107701410,LOC107708768 coding downstream 4562 10707076 ~ 10708056 (-)
LOC122359114 NA coding downstream 8170 10699729 ~ 10704448 (-)
btr16 NA coding downstream 13532 10694920 ~ 10699086 (-)
LOC122359098 NA coding downstream 17618 10689979 ~ 10695000 (-)
LOC122359100 NA coding downstream 23356 10683443 ~ 10689262 (-)
ncam1b LOC107748595 coding upstream 50074 10773572 ~ 10855184 (-)
arhgap32a arhgap32a,LOC107713447,LOC107662764,LOC107582574,LOC107699902,LOC107597520 coding upstream 322453 11045951 ~ 11072510 (-)
LOC122359110 LOC107717180,LOC107713465,LOC107597510,LOC107582585 coding upstream 455838 11179336 ~ 11185100 (-)
LOC122358618 LOC107713430,LOC107701402,LOC107659945,LOC107582659,LOC107717182,LOC107597593 coding upstream 461652 11185150 ~ 11187283 (-)
si:ch211-213d14.1 LOC107701402,LOC107659945,LOC107717182,LOC107582659,LOC107713430,LOC107597593 coding upstream 463921 11187419 ~ 11192049 (-)
G105497 NA non-coding downstream 200355 10475572 ~ 10512263 (-)
G105462 NA non-coding downstream 243181 10466964 ~ 10469437 (-)
G105461 NA non-coding downstream 250549 10461741 ~ 10462069 (-)
G105440 NA non-coding downstream 305333 10406951 ~ 10407285 (-)
G105439 NA non-coding downstream 318286 10394095 ~ 10394332 (-)
G105653 NA non-coding upstream 245671 10969169 ~ 11028778 (-)
G105674 pou2af1,LOC107582583,LOC107713464,LOC107717181 non-coding upstream 445623 11169121 ~ 11171739 (-)
G105694 NA non-coding upstream 581485 11304983 ~ 11306514 (-)
LOC122359088 NA non-coding upstream 601777 11325275 ~ 11325997 (-)
LOC122358449 NA non-coding upstream 698356 11421854 ~ 11425407 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 49030 10658934 ~ 10663588 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other downstream 198556 10512631 ~ 10514062 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 915695 9763871 ~ 9796923 (-)
G105059 NA other downstream 1156831 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 1275821 9434426 ~ 9436797 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 349783 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 578732 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 603014 11326512 ~ 11342116 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other upstream 630148 11353646 ~ 11357553 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 1119268 11842766 ~ 11855895 (-)

Expression


Co-expression Network