G105462


Basic Information

Item Value
gene id G105462
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10466964 ~ 10469437 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU155738
GCGGTTTTCTGTGCCTGCAGGGCTCTGTGCTTCTGCAGTAACTCCTTAACGGTGGTCTTCACACGCACGCCCTGGTATACCTTAGGTTTGTCTGCtggacggagagagagagagagagagaaaaaaggattTGAGTTCATGCAGTGGAACtgattttcaatattttattgcaaatcTCCAGGAAAGCATTCtatgtagatttttattttcattttgccaaaagaaaaatgcaaacgCATTGGAATCGGAGtctttaaaagtctttaaaagtCGTATTCATTTAAAGACAGTGCTTGTGGGTCAGTGATGTGACTTATGCTGGTGAAACGCACGAGACTCGAATAAACCTCTGTGATGATCGTGCATGCGTTATCTAAACCGTTTTGTGGGGATTCGGGTCAAATACGTTcacatcagtaaaaaaaaaaaaatgtatactggGGAGCTGATGATATGCTGGCAGCGATGCAgttgtgtaaaatgtatttaaaaactgttctgAATAAACTATCTGGTTGTCAATAATGaagtttttttacttaatgatCACACCACTTGCCATTAAacgaaaatatttgttttttaatcaaataaaacgaATGAAAATAAACGGAACGAGCCTCGTAAATGATACGATATTCAGAACACTTTATATGCCATTGCCCCTCTACACGTCTGACCGTGCACAGAATTCGTTTTTATATGCCACTGGAAAACgctaataaatataatataacgcTAGATTGCGAAACCATGCCCGCGTTCCCAGCCAAGACTCCATTGGTCTGCGCGCGCCGGCGATCCGGCAGCGAACGGGTTAGTTTTCGCATTACAATAGAACAGTAGTGAATTTCGAGAAACATGCTCTCCAGCCATCTTTGCCCGGGACGGAGGTTTTAATTCGGAGTTCGAGCGGCTTTCTTTAATGCGGCTGCGAACTGAAAACGCGACGAAACCGGCGAGCGAATTATTGACGGCTTCGCGCGCGAAGGCGCGAGACGCGTAAAGTTGGGTTTGCGGGAGGCGAAGCGAAACGCGCCGTGAAACGCCGCTCGCGGGACGGGGAGAAGGGAGCGGACGCCTCGGCGAGCGACAGACGTCGCCGAAGACGAACGCATCTTTacgtaaaagaaaaaaagaaattgcgACTTACCAGACATATTGGCCTGAAAAGGAGGAAACCTCTGGAAGAACTACAGTGAAATACCCCAACGTCAGTTCTTTGCTCTATTATATGGGCAAGAACGAATTATTCACAAAAGTCTCAAAAAGTCTCGACAAAGTCACCTCAAAACACTCTCAGGACATACAATTATACAGTAATATAGCTAGGGATATTTTAGTTTGAGTTTTTCTCCCCTCATCCCTACTATTTAAAACCCCAAGAA

Function

GO:

id name namespace
GO:0000775 chromosome, centromeric region cellular_component
GO:0099080 supramolecular complex cellular_component
GO:0099081 supramolecular polymer cellular_component
GO:0044422 obsolete organelle part cellular_component
GO:0044430 obsolete cytoskeletal part cellular_component
GO:0044446 obsolete intracellular organelle part cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0005874 microtubule cellular_component
GO:0015630 microtubule cytoskeleton cellular_component
GO:0098687 chromosomal region cellular_component
GO:0099512 supramolecular fiber cellular_component
GO:0099513 polymeric cytoskeletal fiber cellular_component
GO:0043228 non-membrane-bounded organelle cellular_component
GO:0043232 intracellular non-membrane-bounded organelle cellular_component

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU155738 True 1388 lncRNA 0.43 2 10466964 10469437

Neighbor

gene id symbol gene type direction distance location
LOC122358984 LOC107713431,LOC107701403,LOC107728777,LOC107597591,LOC100002059,LOC107582660,LOC107659940 coding downstream 37361 10420254 ~ 10429603 (-)
tubd1 tubd1,LOC107728776,LOC107659941,LOC107579697,LOC107581164 coding downstream 124074 10338534 ~ 10342890 (-)
LOC122358610 NA coding downstream 185516 10279272 ~ 10281448 (-)
LOC122358609 NA coding downstream 190996 10272889 ~ 10275968 (-)
LOC122358608 NA coding downstream 194881 10270001 ~ 10272083 (-)
phldb1b phldb1,LOC107701414,LOC107659918,LOC107717178 coding upstream 112766 10582203 ~ 10637949 (-)
arcn1b arcn1b,LOC107713460,LOC107701413,LOC107582579,LOC107597516,LOC107659917,LOC107717188 coding upstream 182761 10652198 ~ 10657750 (-)
pih1d2 pih1d2,LOC107701408,LOC107577555,LOC107699912,LOC107597596 coding upstream 203178 10672615 ~ 10674737 (-)
tmprss5 tmprss5,LOC107713421,LOC107717179,LOC107597570 coding upstream 205943 10675380 ~ 10681244 (-)
LOC122359100 NA coding upstream 214006 10683443 ~ 10689262 (-)
G105461 NA non-coding downstream 4895 10461741 ~ 10462069 (-)
G105440 NA non-coding downstream 59679 10406951 ~ 10407285 (-)
G105439 NA non-coding downstream 72632 10394095 ~ 10394332 (-)
G105437 NA non-coding downstream 74573 10391789 ~ 10392391 (-)
G105435 NA non-coding downstream 78203 10388499 ~ 10388761 (-)
G105497 NA non-coding upstream 6135 10475572 ~ 10512263 (-)
G105653 NA non-coding upstream 499732 10969169 ~ 11028778 (-)
G105674 pou2af1,LOC107582583,LOC107713464,LOC107717181 non-coding upstream 699684 11169121 ~ 11171739 (-)
G105694 NA non-coding upstream 835546 11304983 ~ 11306514 (-)
LOC122359088 NA non-coding upstream 855838 11325275 ~ 11325997 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 670041 9763871 ~ 9796923 (-)
G105059 NA other downstream 911177 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 1030167 9434426 ~ 9436797 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other downstream 1420849 9038896 ~ 9046115 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other downstream 1804100 8657688 ~ 8662864 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other upstream 43194 10512631 ~ 10514062 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other upstream 189497 10658934 ~ 10663588 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 603844 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 832793 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 857075 11326512 ~ 11342116 (-)

Expression


Co-expression Network