LOC122359108 (LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107713453,LOC107701410,LOC107708768)


Basic Information

Item Value
gene id LOC122359108
gene name LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107713453,LOC107701410,LOC107708768
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 10707076 ~ 10708056 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259276.1
ATGAACTCAACTGTTAACAACAATTTGAGCAGCATATCTAGTCCGAACACAGTAAATGAGAAGCTTTTGCTTGTGCAGGTACTGGTGGGAATTCTTCTCTATGTGAATGGACTGATGATTTTCACCTTTCTGAAGAAAGAGACCTTCAGGGAAACACGCTACATTCTGTTTGCTCAGACTCTATTTGTTGACTCTGCTCTTATGCTGATAACTGATTTAACCCTCATAGGGTCATTTTACCAGTTCCCTGTGCACGTAATTCCTTGTTATATCTTCTGCACGCTTACATCTTTGATCTCTGTTGTTTCACCCATGACTCTTGTAGCCATGTGTTTGGAGCGCTATGTAGCCATATGTATGCCTTTAAGACATTCCAGCATCTCCACCCCTAAAAACACCTTCATCGGGATTCTCGTCATATGGTGTGTCAGTTTTATCATCCCATTGTGTATTTTCATAGTCTGTTTTGTCTATATCCCACCTGGTTTCTTGCGTCTTTATGTTGTGTGTACAGTGGAGGCCATGTTACAGATAAAATGGGTGGCAGACATGAGAGCGTCGAGCCTGCAGCTATTATTCATCATAATGTTGAGCATTGTCGTCTCCACCTACATCAAGATTATGTTGGCAGCCAAATCGGCCTCCTCTGAGAGGAAGAGCTCCACAAATAAGGGTCTCAAAACTATAATTCTCCATGGTGTTCAGCTGCTTCTGTGTATGATGCAGCTTTTAATCCCGTATATAGAAATGCCTTTATGGAAAGTAAATGTCATGTTGTTTGTGAACGTAAGATACtcaaatttcattttgtttttgatcttGCCTCGTTGTTTGAGTCCCTTAGTTTATGGATTGCGAGATGAAAAGTTTTACAATGCTCTTAAATATTATGCCTTTTGTGGCATTTTGGTATTCAGTAAGCGCAAAATAAGAGATAGTAAAACATTTAGAGGTGTAGTCGGCATTTCAATACACAATTAA

Function

NR:

description
PREDICTED: olfactory receptor 6B1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259276.1 True 981 mRNA 0.40 1 10707076 10708056

Neighbor

gene id symbol gene type direction distance location
LOC122359114 NA coding downstream 2628 10699729 ~ 10704448 (-)
btr16 NA coding downstream 7990 10694920 ~ 10699086 (-)
LOC122359098 NA coding downstream 12076 10689979 ~ 10695000 (-)
LOC122359100 NA coding downstream 17814 10683443 ~ 10689262 (-)
tmprss5 tmprss5,LOC107713421,LOC107717179,LOC107597570 coding downstream 25832 10675380 ~ 10681244 (-)
LOC122358615 LOC107713453,LOC107701410,LOC107713428,LOC107582658,LOC107701407,LOC107597597,LOC107708768,LOC107582657 coding upstream 4562 10712618 ~ 10723498 (-)
zbtb16b zbtb16b,LOC107713452,LOC107582577,LOC107701406,LOC107597519,LOC107699906,LOC108435307,LOC107748597 coding upstream 13911 10721967 ~ 10772138 (-)
ncam1b LOC107748595 coding upstream 65516 10773572 ~ 10855184 (-)
arhgap32a arhgap32a,LOC107713447,LOC107662764,LOC107582574,LOC107699902,LOC107597520 coding upstream 337895 11045951 ~ 11072510 (-)
LOC122359110 LOC107717180,LOC107713465,LOC107597510,LOC107582585 coding upstream 471280 11179336 ~ 11185100 (-)
G105497 NA non-coding downstream 194813 10475572 ~ 10512263 (-)
G105462 NA non-coding downstream 237639 10466964 ~ 10469437 (-)
G105461 NA non-coding downstream 245007 10461741 ~ 10462069 (-)
G105440 NA non-coding downstream 299791 10406951 ~ 10407285 (-)
G105439 NA non-coding downstream 312744 10394095 ~ 10394332 (-)
G105653 NA non-coding upstream 261113 10969169 ~ 11028778 (-)
G105674 pou2af1,LOC107582583,LOC107713464,LOC107717181 non-coding upstream 461065 11169121 ~ 11171739 (-)
G105694 NA non-coding upstream 596927 11304983 ~ 11306514 (-)
LOC122359088 NA non-coding upstream 617219 11325275 ~ 11325997 (-)
LOC122358449 NA non-coding upstream 713798 11421854 ~ 11425407 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 43488 10658934 ~ 10663588 (-)
atf5b atf5b,LOC107582581,LOC107597512,LOC107717185,LOC107659920,LOC107701416,LOC107713463 other downstream 193014 10512631 ~ 10514062 (-)
dynll2a dynll2a,LOC107554284,LOC103397138 other downstream 910153 9763871 ~ 9796923 (-)
G105059 NA other downstream 1151289 9552634 ~ 9555787 (-)
G105022 LOC107672415,LOC107582616,LOC107588772,LOC107694024,LOC107752388 other downstream 1270279 9434426 ~ 9436797 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other upstream 365225 11073281 ~ 11506177 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other upstream 594174 11302230 ~ 11304810 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other upstream 618456 11326512 ~ 11342116 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other upstream 645590 11353646 ~ 11357553 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 1134710 11842766 ~ 11855895 (-)

Expression


Co-expression Network