LOC122358629


Basic Information

Item Value
gene id LOC122358629
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 11540073 ~ 11541164 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258506.1
ATTcggtttttgacttttttctggttttgacaCTGATTTTGACTCGATACTGACTCCCGGTTTTGACCCTTTTCCGCTTTTGACCTACGGCTTCGGACTCTCCTCTGATTGGTAGCTCTGCTACTGAAAAAAAGCCCGATCCATTCATGGAAATGGGAGCGATCGGTgctttatcactgtgtGTGGAAACACCTAGAGCCGTGTTTGGTGTGCCCCTCATTAGTCTGAGGAAGAGTGGACAGATGAGGCAGGGTCTTCCTCTGGCGCTCACACACATGGTGGAGTTTGTGGAGAAGCACGGTCTCAGCAAGATCGGCCTGTTCATAGTCGGCGGATCAGTACAACGCTGCAGGGACCTAAAGAAAGGTTTCGATGATGGAGGCTTTCCAGAGCGTGACAGTAGGGATGTAGATACTTGGGCCTCCTTACTGAAACATTTCCTCAAGGAAATACCTGGTGGACTTATCCCGGAGCCACACAAGACACAACTGCTGCAGGTGTTCAGGGATTCAAAAAAAGAAGAGCTGAATCAGGCTTTGAGGACTGTGCTGAAGACTCTTCCAGAGGAACATTTCAATGTCCTCTGTTATCTAATGTACTTCCTGTCCCGTGTTGCCGCTGAGAGTCATTTCAATCGAATGACATCTACAAAGCTGGCAAGCGTTTTGGATCCAACATCTTTCAGtgagtgtttgtatgtgtgcattCAGCGAATATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258506.1 True 719 mRNA 0.48 4 11540073 11541164

Neighbor

gene id symbol gene type direction distance location
LOC122358470 NA coding downstream 6442 11532441 ~ 11533631 (-)
si:ch211-213d14.1 LOC107701402,LOC107659945,LOC107717182,LOC107582659,LOC107713430,LOC107597593 coding downstream 348024 11187419 ~ 11192049 (-)
LOC122358618 LOC107713430,LOC107701402,LOC107659945,LOC107582659,LOC107717182,LOC107597593 coding downstream 352790 11185150 ~ 11187283 (-)
LOC122359110 LOC107717180,LOC107713465,LOC107597510,LOC107582585 coding downstream 354973 11179336 ~ 11185100 (-)
arhgap32a arhgap32a,LOC107713447,LOC107662764,LOC107582574,LOC107699902,LOC107597520 coding downstream 467563 11045951 ~ 11072510 (-)
LOC122359552 NA coding upstream 4058 11545222 ~ 11546883 (-)
LOC122358630 NA coding upstream 11737 11552901 ~ 11554310 (-)
thyn1 thyn1,LOC107713442,LOC107699901,LOC107748590,LOC107597527,LOC107582572 coding upstream 32333 11573497 ~ 11575403 (-)
esamb LOC107713439,LOC107699897,LOC107582569,LOC107748586,LOC107597528 coding upstream 40085 11581249 ~ 11615224 (-)
LOC122358631 NA coding upstream 82742 11623906 ~ 11624695 (-)
LOC122358462 NA non-coding downstream 239 11538912 ~ 11539834 (-)
LOC122358725 NA non-coding downstream 13389 11525866 ~ 11526684 (-)
LOC122358535 NA non-coding downstream 26542 11512646 ~ 11513531 (-)
LOC122358449 NA non-coding downstream 114666 11421854 ~ 11425407 (-)
LOC122359088 NA non-coding downstream 214076 11325275 ~ 11325997 (-)
LOC122358562 NA non-coding upstream 11089 11552253 ~ 11552751 (-)
G105716 jam3a,LOC107662760,LOC107699899,LOC107713445,LOC107597526 non-coding upstream 21053 11562217 ~ 11564348 (-)
G105701 vps26b,LOC107713444,LOC107582573,LOC107748589,LOC107699898,LOC106613018 non-coding upstream 27568 11568732 ~ 11571176 (-)
LOC122358516 LOC107741316,LOC107657036 non-coding upstream 90125 11631289 ~ 11631878 (-)
G105767 NA non-coding upstream 112599 11653763 ~ 11654323 (-)
igsf9ba LOC107748591,LOC107713446,LOC107699903,LOC107582621,LOC107662765,LOC107597523 other downstream 33896 11073281 ~ 11506177 (-)
LOC122358627 vps26b,v26bl,LOC107699898,LOC107748589,LOC107582573,LOC107713444,LOC107597524 other downstream 182520 11353646 ~ 11357553 (-)
LOC122358625 LOC107662756,LOC107657263,LOC107729089,LOC107717280,LOC107586244,LOC107709114 other downstream 197957 11326512 ~ 11342116 (-)
LOC122358622 atf5b,LOC107582581,LOC107701416,LOC107713463,LOC107717185,LOC107597512,LOC107659920,LOC107736467 other downstream 235263 11302230 ~ 11304810 (-)
cryaba cryaba,LOC107582578,LOC107701412,LOC107713461 other downstream 876485 10658934 ~ 10663588 (-)
auts2b LOC107726097,LOC107586267,LOC107662780,LOC107657550 other upstream 301602 11842766 ~ 11855895 (-)
chp2 chp2,LOC107586310,LOC107729099,LOC107657559,LOC107662757,LOC107722999,LOC107597544 other upstream 489484 12030648 ~ 12033594 (-)
LOC122359155 LOC107662800,LOC107729090,LOC107586245,LOC107586286 other upstream 739127 12280291 ~ 12290052 (-)
ercc2 ercc2,LOC107743694,LOC107601732,LOC107718279,LOC107585555,LOC107690444 other upstream 1913318 13454482 ~ 13461103 (-)
LOC122359192 usf1,LOC107601709,LOC107717282,LOC107657261,LOC107586305,LOC107677518 other upstream 2203391 13744555 ~ 13751057 (-)

Expression


Co-expression Network