CI01000001_03061892_03081206


Basic Information

Item Value
gene id CI01000001_03061892_03081206
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 3060940 ~ 3081209 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_03061892_03081206.mRNA
CTATATAATAACTTTTCAGTGTTCAGGAATCTACTTTGAGTTGTTTCTTTTTGATTTGATTCATTTATATGAACCATTCAAATGAATGATTCACTAAAACAAAGTGCACAGCGCCTACATATTAAAGAGCATAAGGGTCAATTTTTTGAAATTGAGATTTATACATCATTCGAAAGCTGAATAAATAAGCTTTCCACTGATGTATGGTTTGTTAGGACAATATTTGGCCAAGATACAACTATTTAAAAATCTAGAATCCGAGGGTGCAAAAAAATCAAAATATTGAGAAAAACGCCTTTAAAGTTGTCCAAATGAAGTCTTTAGCAATGTATATCCACTCACAAAAATACATTTTTTTACGGTAGGATATTTACAAAATATCTTCATGGAACATGATCTTTACTTAATATCCTAATGATTTTTGATCTAAAAGAAAAATCAATAATTTTGACTCATACAATGTATTGCTACAGATATACCCATGTGACTTATGAGGTTTTGAGGTCCAGGGTCACATATTATAAGCCGCAAGTTTCTTGCTGACATGTTGCAATACTGTTCTTAAGTTTTTAATGCTTTATTTAACATCACCGACATAATAAATGAAATACTCTGAGTCGGATACGCAAATTATTAAGTTTTGACGATGATGATACTACATGATGAACTACTATAGATAATGTAGTTGGGTTAGTTAGCTCTGCTAAGTTTAATTAGCTACTCTGTCACATTTTGTTTTTGTTGGGAAACCAAAAGTACTGAAAGCATGCATTCAATAAAATAATCATAAGATTCTGTCAGATACAAAACTGTGCTTTGTCATGTATGTTGTTTGGGAGAAAAGAAAATCGAGAGAGAAACAGATGAATGGTACAGTGATTTTGAAATAACTTCTGTATGTTTCTCTCAACATATTTTGTCCAGCACAATTATAAAATTTAGCCTCAGACGAATGAAAATTATCACACTTTGGCAGCCCTTTATTTTGGCTGCTCTGTCGGGCTGCTGCGTTTTAAATAATTACCCTCGCTGCATCATCCATCATGTCCATTGTTTTCTTTGTTCATATTCTTCTTATGTTAAAAGGCACTGGACACATACGCATAGCCTGGTTTGTTTAAAGTTGACGGCTGGAGCCACAGATATTGTATTCGAAAAGTTGGCTCTGCATGCCAAAAATAACCTCGAGCAAGCATCTAGTCTCGTGGTGACGACCATAAAACCTAGCATGAGCATACGGCTAATAATGCACATGGTAGACGTGTTTTACACAGAGCTAGAGGGATTCAAAACCGTGTCTGAAGATCTCAGCCTGCACTTGAATACTCATTATGCAAGTGTTTCAAATCGAAGATTCGGTCTAATGGTTGTCATGGTTGGAAGCCGTACTCGCTGTCAGCCACAGAGCTGTGGAGTCACCAGATTTTTAATTGAGTCTATCTGGCAATGCGCTAATGAGCTGAGGGCAGCTGCAGTGGAAGCAAATGTGCAGCTCTGCCTCATTGCACCACAAATTCATCACCGATACGCAATCAATCCTGCAGACTCACTGACCAGAGATCAGAGCCAAAGGAAAACAAGACGTGAGCAACTGCACCTGTGGATGACCCCAGATCAGTGCTGTATTAAAATCTGTACTTATGCCAGGCAGTTTGAGGATGATGTAAAAGATTACAAAAGCCTCTGCATAAATCTAACAACAGTAATGATGTTTATGCTTAAAACAAGCAAGAAGAATTTGCCAAGAGCAACCGCCATCTTATTACCTCCACGCAGGTGTGATGATTTCCAGGGGCCGATCCCACGGCTTCATCAGCAGCCCCTGTCCCCGGAGACCTGCGGAGAGCCGGATAGCACTCGTCATGAAAATAAACTGAATGAAAAGAAAGGCAAAGACGACATCGAAGTGAAACACGTCCTGAGACATTACAATGCAACCAGATGCTTTACAATCACCATCAACAAAGTCCCGCTTAACGAAGCACAAAGCAAAGCACATCGAGATTTTCCATCCGGAAAACGACAATAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_03061892_03081206.mRNA True 2032 mRNA 0.38 6 3060940 3081209

Neighbor

gene id symbol gene type direction distance location
CI01000001_02838290_02859249 NA coding upstream 201246 2838290 ~ 2859694 (+)
CI01000001_02787356_02792545 KLF15 coding upstream 267689 2785324 ~ 2793251 (+)
CI01000001_02755511_02767404 CPNE9, CPNE5 coding upstream 293215 2754993 ~ 2767725 (+)
CI01000001_02740511_02753173 NA coding upstream 307360 2740511 ~ 2753580 (+)
CI01000001_02708472_02723568 CMTR1 coding upstream 336931 2708472 ~ 2724009 (+)
CI01000001_03200059_03206898 NA coding downstream 118760 3199969 ~ 3206996 (+)
CI01000001_03306094_03325686 NA coding downstream 224685 3305894 ~ 3327549 (+)
CI01000001_03482362_03485979 TMED4.S, TMED4 coding downstream 401153 3482362 ~ 3487253 (+)
CI01000001_03506220_03510588 COQ10A coding downstream 425011 3506220 ~ 3510660 (+)
CI01000001_03593892_03602210 RACGAP1 coding downstream 512683 3593892 ~ 3602260 (+)
G14555 NA non-coding upstream 87856 2972859 ~ 2973084 (+)
G13973 NA non-coding upstream 483126 2577519 ~ 2577814 (+)
G13971 NA non-coding upstream 495633 2564734 ~ 2565307 (+)
G13869 NA non-coding upstream 620848 2425601 ~ 2440092 (+)
G13924 NA non-coding upstream 679800 2380892 ~ 2381140 (+)
G14752 NA non-coding downstream 234944 3316153 ~ 3316434 (+)
G14753 NA non-coding downstream 236012 3317221 ~ 3317458 (+)
G14762 NA non-coding downstream 273329 3354538 ~ 3354774 (+)
G14765 NA non-coding downstream 277999 3359208 ~ 3359432 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 1389936 1667762 ~ 1671167 (+)
G13051 NA other upstream 2015788 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 2568883 483853 ~ 488825 (+)
G12614 NA other upstream 2749999 309144 ~ 310941 (+)
CI01000001_03618075_03620436 NA other downstream 535039 3618075 ~ 3621451 (+)
G15794 NA other downstream 1980009 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 2205540 5279837 ~ 5287698 (+)
G15995 NA other downstream 2630676 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 4451363 7531541 ~ 7540586 (+)

Expression


Co-expression Network