CI01000001_03830254_03833027


Basic Information

Item Value
gene id CI01000001_03830254_03833027
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 3830254 ~ 3833027 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_03830254_03833027.mRNA
CTTTCGCATTCCTTTGCTTGGTGATTTCAGTGGGTGCGCAGACGAATCACAGACTGACCTGCTATCTGGATGTTTTAACACACCGCACATGTGAGGGTCCATGTACTCACATCATTGTCCCCACGATCTCCCGTGATGAAGACCTTGACCACCAAAGCTTGTCGGAAGATGACCGCATTATTCTTAGAAGGATGAAGGAGAGGTTGGAGCTGATGTCTGCTACTGAGGGCAGTGTTGAGAACTTCATTCAGACGAACAAAACAGTCCAACACTGGCAGGATAAGCAAGTTGACCTGCAAAAGCTCAATCTAGTCATGCCTGTTTTTCTCCGGAGATCACACCGAAGGCATTATCATAGACATCTTCCCAAGCATGATGACATGAATTCAGAGAACAGAAAGAAGGATCACATCAACGTTTTAGGCTTACACATGGGCGTTCAGGTGTGTCAGGCCATTAAAAGTGGACAAGAGCAGTTTATTACTTTCACAGTTCTCTCAGATGAGAATGATCTTGTCAAGGAGGTGCTCCAGAAAGGCTTTGGTGGCATAGGGGTTGTCTTCATAGATCTAGACGTCTTTGTTAACTCCACATGTGCAAGCATTACTCAAGATGAAAGGGCAATTGTTGAATCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_03830254_03833027.mRNA True 638 mRNA 0.45 6 3830254 3833027

Neighbor

gene id symbol gene type direction distance location
CI01000001_03821989_03823336 SLC48A1A coding upstream 6670 3821989 ~ 3823584 (+)
CI01000001_03719251_03775929 ITGA5 coding upstream 53829 3718190 ~ 3776425 (+)
CI01000001_03669438_03673748 CSRNP2 coding upstream 156467 3668725 ~ 3673787 (+)
CI01000001_03650790_03662852 LSF, TFCP2, TFCP2.L coding upstream 167310 3650636 ~ 3662944 (+)
CI01000001_03638240_03647295 POU6F1 coding upstream 182574 3638240 ~ 3647680 (+)
CI01000001_03865986_03866675 NA coding downstream 32330 3865357 ~ 3867469 (+)
CI01000001_03867875_03890850 NA coding downstream 34813 3867840 ~ 3890989 (+)
CI01000001_03983212_04011240 NA coding downstream 150101 3983128 ~ 4011596 (+)
CI01000001_04085864_04225894 PLXNA2 coding downstream 252837 4085864 ~ 4225894 (+)
CI01000001_04296723_04300348 NA coding downstream 463574 4296601 ~ 4300975 (+)
G14874 NA non-coding upstream 134862 3636855 ~ 3695392 (+)
G14878 NA non-coding upstream 145786 3683322 ~ 3684468 (+)
G14873 NA non-coding upstream 196671 3633093 ~ 3633583 (+)
G14842 NA non-coding upstream 205624 3621578 ~ 3624630 (+)
G14856 NA non-coding upstream 246212 3583116 ~ 3584042 (+)
G14911 NA non-coding downstream 8116 3841143 ~ 3841354 (+)
G14912 NA non-coding downstream 11442 3844469 ~ 3844841 (+)
G14917 NA non-coding downstream 18804 3851831 ~ 3852048 (+)
G14931 NA non-coding downstream 45492 3878519 ~ 3878797 (+)
CI01000001_03618075_03620436 NA other upstream 208803 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 2159250 1667762 ~ 1671167 (+)
G13051 NA other upstream 2785102 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 3338197 483853 ~ 488825 (+)
G12614 NA other upstream 3519313 309144 ~ 310941 (+)
G15794 NA other downstream 1228191 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 1453722 5279837 ~ 5287698 (+)
G15995 NA other downstream 1878858 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 3699545 7531541 ~ 7540586 (+)
G17234 NA other downstream 4199097 8032124 ~ 8032483 (+)

Expression


Co-expression Network