CI01000001_03867875_03890850


Basic Information

Item Value
gene id CI01000001_03867875_03890850
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 3867840 ~ 3890989 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_03867875_03890850.mRNA
GTTTAAAACAGCATGTTTTTTTTTTTTTTTTTACAATGAGCCGTGAGCTCAAGTCTGAACAGGAGCAGGAATGCCCCACCCCTCCTTTTGACTTCTATAGGGATTCGAAACAAGACAATGGGCATGTGGATGTTCTGAGGCAATTTTTGTACATTATGAATCTGTATGAGGTGTCTGCAGAGCTGTCTGAGCATGCAGTGACCACCCATTCTTTCTCTTTCTGTCTCTTCTCAACCCCAGGAACTCTACACCAGAGGGGGAGGTTTGAAATCCTGTCAGATAAGATCTCTATTGCAGCTTGCCTCTCGTCTTCAGTGGTGAAGCTCAGAGAAACTCAGCCAGCACGCCTCCAAAAACACCAGAGGAGATTAGCCTCCATTTACTCCTCAATCAGCTCCCACTTTGTCCGGACTCTGACATGTAATTTGATTTCATCTTTGCCTCACGCTGGCGAGTTTGCACCTGAAGCCTGCCTCCAATTAAGATGGAGGTGCCGGGGATGCGTCGAGCAAGCAGACTGAGAATTATGGGATTTCACAGCGTGTTCCAGCTTGGCTAAAATCCCTTCCTCTCTACAATTATCAGAAAAGAGCGCCGCCACCTTGTTCATCTGCTTGATAGTGGCACTTTTCAGCACACAGTGTTAATGAGAGCGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_03867875_03890850.mRNA True 660 mRNA 0.47 3 3867840 3890989

Neighbor

gene id symbol gene type direction distance location
CI01000001_03865986_03866675 NA coding upstream 688 3865357 ~ 3867469 (+)
CI01000001_03830254_03833027 NA coding upstream 34813 3830254 ~ 3833027 (+)
CI01000001_03821989_03823336 SLC48A1A coding upstream 44256 3821989 ~ 3823584 (+)
CI01000001_03719251_03775929 ITGA5 coding upstream 91415 3718190 ~ 3776425 (+)
CI01000001_03669438_03673748 CSRNP2 coding upstream 194053 3668725 ~ 3673787 (+)
CI01000001_03983212_04011240 NA coding downstream 92139 3983128 ~ 4011596 (+)
CI01000001_04085864_04225894 PLXNA2 coding downstream 194875 4085864 ~ 4225894 (+)
CI01000001_04296723_04300348 NA coding downstream 405612 4296601 ~ 4300975 (+)
CI01000001_04311013_04315588 NA coding downstream 420024 4311013 ~ 4315765 (+)
CI01000001_04328211_04330988 NA coding downstream 436587 4327576 ~ 4331052 (+)
G14917 NA non-coding upstream 15792 3851831 ~ 3852048 (+)
G14912 NA non-coding upstream 22999 3844469 ~ 3844841 (+)
G14911 NA non-coding upstream 26486 3841143 ~ 3841354 (+)
G14874 NA non-coding upstream 172448 3636855 ~ 3695392 (+)
G15202 NA non-coding downstream 43583 3934572 ~ 3934835 (+)
G15208 NA non-coding downstream 47670 3938659 ~ 3939680 (+)
G15225 NA non-coding downstream 61383 3952372 ~ 3952917 (+)
G15239 NA non-coding downstream 86052 3977041 ~ 3977851 (+)
G15245 NA non-coding downstream 90462 3981451 ~ 3981654 (+)
CI01000001_03618075_03620436 NA other upstream 246389 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 2196836 1667762 ~ 1671167 (+)
G13051 NA other upstream 2822688 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 3375783 483853 ~ 488825 (+)
G12614 NA other upstream 3556899 309144 ~ 310941 (+)
G15794 NA other downstream 1170229 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 1395760 5279837 ~ 5287698 (+)
G15995 NA other downstream 1820896 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 3641583 7531541 ~ 7540586 (+)
G17234 NA other downstream 4141135 8032124 ~ 8032483 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location