G15208


Basic Information

Item Value
gene id G15208
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 3938659 ~ 3939680 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU16998
GTGACTACAGTGGTTCAACCTTAATGTTATGAAGCGACGAGAATACTTTTTGTGCGGCAAAAAAACAAAATAATGACTTTATTCAACAAGAAGGTGAGTTGTGTCAGAGCAAAAATCTGCAGGACAGCAGCACTCAAGAACAACCATCCCTGAGCTTGTGATATGTCTCAGCTATGTACACATTATCACTGATCTGTTAACGGCTATAATAGCAAACATACGAGTCTCCATAAACTCCTGGCATCTGAGCCACTAAGGACGCAGTGGTGTAATTTTATTTATGAAGGAAATTTGTCCAGATAAATTCATATACCAGTATGTGTAAGTCATTAACACTAGAATGCTTCACACGATCGTCAGTAAAACACAGGATTTGCACAGAAATTGATTCTCAAAGATGGATCGATACCAACTGATCCAATTTCATATATATTTATTTTGTGATGTTTGCAAATTGTCTTCCTGAATGTGTTTAGTAAGCACGTTGCTAATGTACTGTTAAATGCGGCTAAAATTACCATTGTTTCTTACTGTATTCACGGAGACCAGAGCCATTTCGTTTTTTTTTTATTTTTAACCCAAAAACGTGTATAGTCTGTATAATTCATAAACACAACTTCATTCTTATTGAGTCTCTCCAACAGTGTGTAGCTTTAGCCACGTTAGCCGTGCATCACGCTATCAGACTAATTCAGAATCAAATTTTAGCAAAGATCCACAAAATACATGCCATATCTATGTTATATGCTGCATCAAGAACAGTTTAATGATCCATTTTGCGAGTTATATTTGCTGTGTTAGCTTCTGTATTATGTATGCCTCAGTGTATTGGAATGACGAGCGAGCTTGGGGGCGGGGAGCACGAGCTCATTTGCCTACAAAAACGGCTTGATTTTGCTCACACCAAATTCGGGGGAAATTTGACAAGCTATAATAAATTATCTGCGGGGTATTTTGAGCTGAAACTTTACAGACACATTCTGGGGACACCACAGAATTATATTACGTCTTGTCAAAAGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16998 True 1022 lncRNA 0.39 1 3938659 3939680

Neighbor

gene id symbol gene type direction distance location
CI01000001_03867875_03890850 NA coding upstream 47670 3867840 ~ 3890989 (+)
CI01000001_03865986_03866675 NA coding upstream 71507 3865357 ~ 3867469 (+)
CI01000001_03830254_03833027 NA coding upstream 105632 3830254 ~ 3833027 (+)
CI01000001_03821989_03823336 SLC48A1A coding upstream 115075 3821989 ~ 3823584 (+)
CI01000001_03719251_03775929 ITGA5 coding upstream 162234 3718190 ~ 3776425 (+)
CI01000001_03983212_04011240 NA coding downstream 43448 3983128 ~ 4011596 (+)
CI01000001_04085864_04225894 PLXNA2 coding downstream 146184 4085864 ~ 4225894 (+)
CI01000001_04296723_04300348 NA coding downstream 356921 4296601 ~ 4300975 (+)
CI01000001_04311013_04315588 NA coding downstream 371333 4311013 ~ 4315765 (+)
CI01000001_04328211_04330988 NA coding downstream 387896 4327576 ~ 4331052 (+)
G15202 NA non-coding upstream 3824 3934572 ~ 3934835 (+)
G14931 NA non-coding upstream 59862 3878519 ~ 3878797 (+)
G14917 NA non-coding upstream 86611 3851831 ~ 3852048 (+)
G14912 NA non-coding upstream 93818 3844469 ~ 3844841 (+)
G15225 NA non-coding downstream 12692 3952372 ~ 3952917 (+)
G15239 NA non-coding downstream 37361 3977041 ~ 3977851 (+)
G15245 NA non-coding downstream 41771 3981451 ~ 3981654 (+)
G15298 NA non-coding downstream 100622 4040302 ~ 4040753 (+)
G15287 NA non-coding downstream 160442 4100122 ~ 4133524 (+)
CI01000001_03618075_03620436 NA other upstream 317208 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 2267655 1667762 ~ 1671167 (+)
G13051 NA other upstream 2893507 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 3446602 483853 ~ 488825 (+)
G12614 NA other upstream 3627718 309144 ~ 310941 (+)
G15794 NA other downstream 1121538 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 1347069 5279837 ~ 5287698 (+)
G15995 NA other downstream 1772205 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 3592892 7531541 ~ 7540586 (+)
G17234 NA other downstream 4092444 8032124 ~ 8032483 (+)

Expression


Co-expression Network