CI01000001_04296723_04300348


Basic Information

Item Value
gene id CI01000001_04296723_04300348
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4296601 ~ 4300975 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_04296723_04300348.mRNA
ATTTAAAACAGGTGTCTGAAAGTGGTTGTGTGTGCCTTTGTGTGGTGTGAATGTACAAGAATGCTGTATGTTTTAGTGTTCCATGTTATGATAACCAAAACGATAAATTCCACAAACAGGAAATGACAGGGAGCAGGAAATATCACAAAAAGGGCACTTCTCAGGTTACGTGTGGTTCCATATGTGGAGCCTTGGCCGTGCCGTCGGACTCTCCTCACACCGTAGTGCTAGCGGTCACACTCCACCCACTGCTGCTGCTGGCCAAAAACTGGACAGCCCAGATGTTCTCCGCGCGGCGCCAAGACACAGATACATGTGAACGATTCCCGCCCAGTCACACCGAGGGGGAAATGGGATCGCGTGAGGGTGTGCACAGAAAACCCCTAAACTCTTTCAGCCCTGCCCCAGCGCCTGCATACACACTCTCACACACCTCAGCGTGCTCAGAGACCAGAATGGCTGTACGAAGAATGAATGAACTCTGGAAAACCATGGCTCTGGCTTTAATGTTCGGCTTTCTTTTGCTTCACATTGTGGGCTATATACTGCTCTCCGTCTGGGTGGAGCTGGCCGAAACATGGGCGTATGTGTGTGTTTTAGGGACTGAAGAGTTTGGAAAAGCCTGGAAACTGTCTGAGGAGTCTGTTCAGCATCTTTATCCTGATCTCTGTGACTGCATGTGGTGAAATTGTCCTTTCGAAAAGCAGACGTACGAATGGATTTATTGTAGACTGAAATGTGGCCCACAGTGTTTGGTTCATGTACTCCTGAAAATAGATGAATGTTTACATTATCAGCCACAGGGATGAAGACAGTCGTGTGTAAACGGCACTCTCTTCTCAGGGAGGTTACCACAGGTCCGTTATTTCAAATAGGAGTAAAAAGAGCTGGTTTGTAAGTGACGCCCATGTGGGCAGGGCAGAGCTGTACGCCCCATTCCCTTTTCCCAAGAGGTGAGTATAGTTTAATGGTGGGAAGTCTAGTTTAAACACAGTGCAACTTCTCAAAAGCGTGGTGGCTGAACCAATCAGACTTTTACCAGGAAACCAGTTGTTAAAATGTAAAAGAAAACAAATATTAGAAAAGAGAAAACTATGATTTTGGTTAGTTGAACTACAAAAATGCACTTCCATGGCAAACAAACACTCACACAGCACATAATCAGTTTTCAAGCTAAATGAAAAATTGAATTATGCAGCCTTGTTAAAGGGAAACCTGCGTAGTTTGCCAAAGCTAGTGTGTAATACGAAATCTGAAGTTAACGTACCCTATATTCCTATAGTTCTCCTCAAATGTCCTGCTCAGTGGCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_04296723_04300348.mRNA True 1313 mRNA 0.45 5 4296601 4300975

Neighbor

gene id symbol gene type direction distance location
CI01000001_04085864_04225894 PLXNA2 coding upstream 70707 4085864 ~ 4225894 (+)
CI01000001_03983212_04011240 NA coding upstream 285005 3983128 ~ 4011596 (+)
CI01000001_03867875_03890850 NA coding upstream 405612 3867840 ~ 3890989 (+)
CI01000001_03865986_03866675 NA coding upstream 429449 3865357 ~ 3867469 (+)
CI01000001_03830254_03833027 NA coding upstream 463574 3830254 ~ 3833027 (+)
CI01000001_04311013_04315588 NA coding downstream 10038 4311013 ~ 4315765 (+)
CI01000001_04328211_04330988 NA coding downstream 26601 4327576 ~ 4331052 (+)
CI01000001_04369131_04373697 SNPHB, SNPH coding downstream 68156 4369131 ~ 4373972 (+)
CI01000001_04422037_04431229 NA coding downstream 121062 4422037 ~ 4432602 (+)
CI01000001_04433559_04437385 NA coding downstream 132584 4433559 ~ 4437450 (+)
G15288 NA non-coding upstream 22616 4240551 ~ 4273985 (+)
G15287 NA non-coding upstream 163077 4100122 ~ 4133524 (+)
G15313 NA non-coding upstream 187241 4103809 ~ 4109360 (+)
G15298 NA non-coding upstream 255848 4040302 ~ 4040753 (+)
G15245 NA non-coding upstream 314947 3981451 ~ 3981654 (+)
G15338 NA non-coding downstream 42913 4343888 ~ 4348581 (+)
G15360 NA non-coding downstream 55241 4356216 ~ 4356616 (+)
G15370 NA non-coding downstream 180863 4481838 ~ 4486799 (+)
G15371 NA non-coding downstream 185945 4486920 ~ 4491381 (+)
CI01000001_03618075_03620436 NA other upstream 675150 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 2625597 1667762 ~ 1671167 (+)
G13051 NA other upstream 3251449 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 3804544 483853 ~ 488825 (+)
G12614 NA other upstream 3985660 309144 ~ 310941 (+)
G15794 NA other downstream 760243 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 985774 5279837 ~ 5287698 (+)
G15995 NA other downstream 1410910 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 3231597 7531541 ~ 7540586 (+)
G17234 NA other downstream 3731149 8032124 ~ 8032483 (+)

Expression


Co-expression Network