CI01000001_06420606_06430104 (CAMKVL)


Basic Information

Item Value
gene id CI01000001_06420606_06430104
gene name CAMKVL
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 6420606 ~ 6430133 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_06420606_06430104.mRNA
TTATGTTGAAACAGCATTCGTTAGAATTTCACAATTTCTGTGTGGTGGGACCTGTCTTGGTGGATGCTGTCATGCCATTTGGGTGCCTTGCTCTGCGAGATGGGCGGACATACAACAGCCTGTCAGACGTCACTGACAAATACGAGATTGGACAGGTCCTCAAGGCGAAAGAATTTTGCGAGCTGTGCCTGGTGAAGGAACGACAGACGGACAAGGTCTATGTGTGCAAGAAATTCCTCAAGAAAGATGGCAAGAAAGTGCGGAAGGCAGCCAAGAACGAGATCATGATCTTGAAAATGGTCAAACACCCAAACATCTTGCAGCTGATTGATGCATTCGAGACCAGGAAAGAGTTCTTCATCATACAAGAACTGGCCACAGGTGGAGATGTGTTTGACTGGATCTTAGACCAGGGGAACTACACAGAGAGAGATGCCTCCAATGTGATCCGTCAGGTCTTAGAAGCAGTGGCGTACCTTCACTCCCTCAACATCGTCCACAGGAACTTAAAGCTGGAGAACTTGATGTACTATAGAGAGAGTAACCACAACAAAGTCGTGTTGCGGGACTTCTACCTGTCCAGGTTTGAGAACGGCTCAATCACTGAACCCTGCGGGACACCTGAGTACCTGGCCCCTGAAGTGGTGGCGCGTCATCGCTATGGAAGACCAGTCGATTGTTGGGCGGTGGGGGTCATTATGTACATACTGTTGTCTGGAAACCCTCCCTTCTATGATGAAACTGAGGAGGAGAACACCGACATGCACAACCGGATCATCTTCTGCCGCATTGTTGCTGGAGAATTCGAGTTTGATTCACCGTACTGGGATGACATTTCCCCTGCTGCAAAAGAGCTGGTCTGCAGACTTATGGAGGTTGACCAAATGCTGAGAATTACTGCGCAAGATGCACTTTCGCATGGATGGATTGCTGGAAATGGGGCTTCAGAAAAGAATCTGAAGGCAGGAGTCTGTGCTCAATTTGAGAAAAACTTTGCCAAGGCAAAGTGGAGGGAGTTGAAGGTACTGTTGATATTCGCGGGGCAGCCTAGAGGCAGAGATTCTTTTCTCTGTGTAACAATCTTTGACTTGGGCACTCATATTTCCTCTAGCATCATACTCAGTGTACGTGATAGAGAGGGAAAACTGCTACCACAGATTGCCATACTATTAATAATGCATTTCACCTCCATAGCAAAGAAGACCTTACGTTACTTTATAATCCACTGGGCACTAAGTGTTTGGTGTTTTTCATTTCACTTTCAGAAAGCGATTCGTGTCACCACATTCATGCAGCGCCTCAGAGCCTCTGAACTTGGATCGTCTGATAGTGCAGTAGAAGGCCAGGCAGAAAGGGTCAACGCAGATGGATTAGATGGTAAGGGGATACAAACAGACTCAGGTGGCGTTTCTAATATGAGCGTGTCCCACGAGGTGTCCGTCGAAAGTAGACCCATGAAGAATCAAGAAGAGGAGAAAGCAGGACATATAAAAGTAGAAGAGAAAAAGGCAGAGACCCTTGCCCAATCAAACAGCTCTTTAAAAGTACAAGCAGAGGAGCCGAACAAGCGAGAGACTACCGAAAGCACTTCTGAAATGGAAGACAAATCATCAACAGGAGCGAGCCAGAAAGCAGCACCCATCCAGCCCATCAAGACCTCAGACAGCCGAGAGAACAACATCCCCACAGAGCAGGAGGCCACAACTGTTGGCAATGTTGAGAAGAAATCACCTCTCCCTGATACTCCAAATCGACGCAAGATTGCCGCCAATCTCTCAATGGATCATGCCTCATGTTCAGATGCCAAAATCGGAACCTTGTCAGTGGGAAAAGAAACACCTCTTCAACCAGAAAACAAGAAAGACACAGTCCACGATATGGCCGCAAGCAGCTGGTGTCAAACACAGCTCCCAGAAGCAGTTGCAGAGAGGCCAGCAGAAGTTGGGGCGACTTGCGAGGTCAACCCCAAGAGCAGAGAGTTGAAGAAAGGACGACCGGACAAGGGGAGCCAATCAGTGAAAAACATCCAGTGTACGTATTCGGGATTGAGATCTTCAAGTCTCGGCCATGATAAAACGGTATTTGAGCAGGAGCTCCAGGAGATGGTCCATGGTGCATCAGGGTACGGGAGCACATACTGTCCAACCTACTCTGTCGGACAGTACAGTGGTCTAGAGCCAGGAAGTGGAGCCAGCGCAGACTGGCAAATGGATTGTGTAATCGAACAAATTGAGAAGCAAATGGCTGCCGTGCTAGAGAAGATCGAGGGGGACATGCCTTCTTTGCTGGAGCAGATCAGCGATCATCCTGAGACCCTTCCGAGAGCAAAAAGCGCCAGCTCTTCCCCATCACCCCGACCTCGCTCGTACCATCATTCAACCCCGCCACCCCTTCCCACCACACCTCGCCCAGCAATGCCTTCTCTACCACACCTGACCATCCCGCCTCCTTCATACCCACCACCTTCCCCTCCCAGTCACATCCAGGGTCACAGCCATCCAACTGCTGACGAGGGTAACAGCGATGGCCAGAAGTCTGCAAAGCAGTCTGGCCAATCACCAAGGGGAAGTGTGTCAGGAAAAGGCTTGTAAATATGCTAAGAGGATGTGAATGCTCAAGA

Function

symbol description
camkvl Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Is expressed in Purkinje cell.

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K08812 CAMKV; CaM kinase-like vesicle-associated

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_06420606_06430104.mRNA True 2620 mRNA 0.49 12 6420606 6430133

Neighbor

gene id symbol gene type direction distance location
CI01000001_06363645_06370085 ADNP coding upstream 50505 6363645 ~ 6370101 (+)
CI01000001_06325915_06358454 SLC35C2, COL20A1 coding upstream 61932 6325074 ~ 6358674 (+)
CI01000001_06309664_06321614 SLC35C2 coding upstream 98518 6309361 ~ 6322088 (+)
CI01000001_06303405_06305351 TNNC2 coding upstream 115255 6303405 ~ 6305351 (+)
CI01000001_06297032_06300530 TNNC2, TNNC2.L coding upstream 119946 6297032 ~ 6300660 (+)
CI01000001_06442969_06455699 UBA1 coding downstream 12836 6442969 ~ 6455859 (+)
CI01000001_06458769_06470107 ARHGEF3L coding downstream 28636 6458769 ~ 6470495 (+)
CI01000001_06474891_06479887 USP21 coding downstream 44758 6474891 ~ 6480025 (+)
CI01000001_06484769_06502296 CCDC30 coding downstream 54636 6484769 ~ 6504149 (+)
CI01000001_06519105_06525958 NA coding downstream 88500 6518633 ~ 6526120 (+)
G16212 NA non-coding upstream 138054 6282339 ~ 6282552 (+)
G16193 NA non-coding upstream 193461 6226859 ~ 6227145 (+)
G16189 NA non-coding upstream 211826 6208552 ~ 6208780 (+)
G16188 NA non-coding upstream 212252 6207632 ~ 6208354 (+)
G16172 NA non-coding upstream 243474 6176623 ~ 6177132 (+)
G16247 NA non-coding downstream 2951 6433084 ~ 6433328 (+)
G16257 NA non-coding downstream 84988 6515121 ~ 6515398 (+)
G16284 NA non-coding downstream 242049 6672182 ~ 6673511 (+)
CI01000001_06718133_06747744 KCNAB2.L, KCNAB2A, KCNAB2B, KCNAB2 non-coding downstream 293676 6717159 ~ 6747744 (+)
G16317 NA non-coding downstream 370035 6800168 ~ 6800381 (+)
G15995 NA other upstream 705655 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 1130650 5279837 ~ 5287698 (+)
G15794 NA other upstream 1355902 5061218 ~ 5064704 (+)
CI01000001_03618075_03620436 NA other upstream 2799155 3618075 ~ 3621451 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 4749602 1667762 ~ 1671167 (+)
CI01000001_07531945_07539781 NA other downstream 1102439 7531541 ~ 7540586 (+)
G17234 NA other downstream 1601991 8032124 ~ 8032483 (+)
G17353 NA other downstream 2785889 9216022 ~ 9228859 (+)
G17354 NA other downstream 2804330 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 2988195 9435836 ~ 9436373 (+)

Expression


Co-expression Network