G14741


Basic Information

Item Value
gene id G14741
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 3531198 ~ 3535223 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU16487
GGAAAAGGGTAATTAAATACAAATATATAGATACAGTGGCTCAAGGACGTTCGTTTCAGACTTCATGCTGCCTGTAACATTGTCAAAGCTCTGGTAAGAAGGATTTTCTTGGACCTACAACACAACAGAACATTCTGAGATATGTAACTTGCTTAGTTGCATCACAATGTCAACACACAGAACTTACAAGGTTTCTACATATAAAATTTTTTTTTTTTTTTGGACATTCTGTGGTAGTTGACAATTTAGTACCATGTGATGTATATAAAAGTACTCTGTTATTACCAATAACTTTACCATAGTACCACCACAGGACATTTTTGTAACAAATATAAATTAATGAAATGCAGCACACACAAAAATCTAACAAAACAAATTTACTAAATGCACAAACTGCCACATTCAAAACTGTAACATAAATCAGTACCGAAAGGTTTGGTCACAGAGTATTTGGCACATTTGATCTGTAAACATAAAATCTGCATATGCATGACAATGGCAACGAGTTTTGCTTGCTTGCCAGCTAAAATATAGTTACTCTCAGTGTAAAACTGCACACAGCAGAGCTTGACGTTTATGAAGAGATATGATGTATGCTGGAGACCTTATGAGGCTTCTGTAAACAGCAGCATGCAGTGTGATTCATTGATTTTGTGCCCTTACAGTGAGGACAGTCTGTGTACTTATACCGCAATGCTTTGGAGATGTTTAAACCTCGCTGTCTGTGCACACTGTGTACTTTGTGTTAACACACTGTATGCAATTTCTACATTTTGTCATCAATTTCTATTGCGTTTGGCACAGATATTATGAAAGAGTCAGAGTATACAGCACCATGCAGCCGATTTGTCATGCATATAAAGAGCCAGGTTCAAATAACATGTTGCAGTTTACATTCAATCAAATCTTCCACAGTATACGCTAGATCAAAACACTGGCCATTTACAGCCAATAACAATGTCTGTTTGGCTGATTAACAAATGTTTAGTTTGGTGAATTGGAAACTTTTTTTAGTGAATTTTAAATAAATATTGTGTAAAACAGGCGTTAATTTCAGCAATCTTAATTGCAGTCATTATTGTAGTATCAGCATTATCATCCACTCTTCTTTCTAGATATTAGCATTAGTGTTATTTTAGTATTATTTACATTCTATTATAGTATTATTATGGTTTTATATGTTCCAATTTAATTTTAGTTTAAGTTTTAGTAATTTTGTTATGTGCTTTTGTAATATTTAAATATTTTAATTTACTTTTTTTTAGTACTTCAGTACAACCTATTTTATTTCAGTTAGTTGTCAAGACAACATTTCTAATATTTTTTTAAGTTAAGTTTTTCATCTAATATTCATAATAGGGCTTTTCATACTGCGCTTAACCCCGGGTTATCGTCGTTCTAAACACCGCTTTTAACCCCGGGTAAAGGAGCGTTTCACACTTGTACTTTAGATGCGGGGTTAGCACCGCTTTTTACCCGGGGTTATGAAATCCTGCTTTTTTTGCGGTGCCAAACATGCAGTGTGAAACGATGCGGTGTTAGAACGTTACAAATAGATGCTTAGCGACCGACAACCAATCACGTGCCTTATATTCACGCGCTTTGGGCAGTGAAGGAAACACCGCGCGAAGTATAAACAGTCGTTTCTGCGTATGATAGGAAAAAATGTCAAACGGCGATGGAAAACGCGACAATTGGTGTGAAGAAGAGGCCGTCATTCTTACCTTTATAGTTCGAAAATTTTACTCAGGAAAAAAAATATATATATTTCAGTCAGCAATGTGCAATATGAGGGCGCGCAATGCTAGAGTTTATATATAAACAGGTCACGTGCTGCGTTTGTCCAGTCTGACACCGCAAAAATGCAGATAAGGACTTTATCCCGGGGTTTAGGAATGTGCAGTGTGAAACGGTAGCTTATGAATACCCAGGATTAACTGTTAACCCCGGGTATAGTATAAGCAGTGTGAAACGTGAATAAAGATAACCCAGGATTTCGTTTACCAGGGGTTTAGAATGACCCAGGATTAACAATGTCAAGCGTGAAAAGCCCTATATTGTATTGTATTCAGTTTTAGCTTAACTTCAGCTTTCAATTAACAAAATGACTTTAACAGTTTTAGTAAAACAATAACACTGTATCTGCTGACCACTAGTATTTTCAACTTCACTATCCATGCTGCACAAAACATTAGTTCTCTTTCACCACAAGGTGGCGCTACAACATCAAGGCTGATCAACATGCCTATGCAGCATCTTTTACCCATTTTATACATAAACTGACTAAAGATGTTGATTACCTTAGACATTATACTGTGTGTGTGATTTATTTGAAAACTGTATGAACCAGAGCAGTTGTGTTTAATCTTCCTTGACACTCAAGAGACATTTACAGTTGCAGTCTGAACAAAAAAACAAAAAAACAAAAACTTCCCAAAGTTGAGTTTGTGGTAAATAGCTGGTGGATTTGGTCCTCTTGATCTCCATTTTGCTCCCTTTTCCTTTGGTGAAATAACGCAACCTGAAGTTAGTCACCAAAATGGGCACCTTTGAGGACTGAGAGCGGACACAGTGGAAGAGATCACTCTTCCTCCTCGTCCTCCTCCTCTTCCTCCTCCATGTTGAGGAAGGGGTCGTATTTGAGGCAGTTGTGGAGGTACTGAAGGAGGGTGCGGTGCAGGTGTTGATTGCTCCGTTCTTCTCTCAAGGTGTGGCCTTCATCTGGATACAGCTGAAGGGTGTAGTTGGCCTCTACCTTCACCAGACGACTCAACAACTCAGCGCTATGTTGGAAATGTACCCGCGCTAAACACATACAAACAAGTATTACTGAAAATCCACCAATGATGCATCTGATTTTAAATTTCATTATTATGTAAGCTAACCATCTGCAGTCCCATGTATGAGGAGGAAGTTTTCATCTTTTAGCTTACTGATGTCGTCCAACAAAGAAGCAGTCTGCAAATGTACAACAGAAACACGTGACTTTGTTAGGTCAGTGAATACAGTGGCAGAAGTGTAGTTACTAGATTTTATATTGGTATCTCAAATCACTATATAAAAAGGTAATTGTAGTTTTATTTTTCCCCAGTGTGACTTTATATCCAATTATGGAGATAAATAACTGTAACTTTATATGTCACAATGTGACTTTAAATCTCAAATTTTTGGCTTTATGTAACTGTAACACTATATGAGACTAAATTTCACAATTGTGATTGTTTCTCGTAACTGTAACTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16487 True 3242 lncRNA 0.37 2 3531198 3535223

Neighbor

gene id symbol gene type direction distance location
CI01000001_03506220_03510588 COQ10A coding upstream 20538 3506220 ~ 3510660 (+)
CI01000001_03482362_03485979 TMED4.S, TMED4 coding upstream 43945 3482362 ~ 3487253 (+)
CI01000001_03306094_03325686 NA coding upstream 203649 3305894 ~ 3327549 (+)
CI01000001_03200059_03206898 NA coding upstream 324202 3199969 ~ 3206996 (+)
CI01000001_03061892_03081206 NA coding upstream 449989 3060940 ~ 3081209 (+)
CI01000001_03593892_03602210 RACGAP1 coding downstream 58669 3593892 ~ 3602260 (+)
CI01000001_03609191_03615121 NA coding downstream 73968 3609191 ~ 3615416 (+)
CI01000001_03618075_03620436 NA coding downstream 82852 3618075 ~ 3621451 (+)
CI01000001_03638240_03647295 POU6F1 coding downstream 103017 3638240 ~ 3647680 (+)
CI01000001_03650790_03662852 LSF, TFCP2, TFCP2.L coding downstream 115413 3650636 ~ 3662944 (+)
G14733 NA non-coding upstream 488 3516800 ~ 3530710 (+)
G14743 NA non-coding upstream 51341 3476585 ~ 3479857 (+)
G14731 NA non-coding upstream 74295 3428794 ~ 3456903 (+)
G14777 NA non-coding upstream 155535 3375412 ~ 3375663 (+)
G14775 NA non-coding upstream 156190 3374675 ~ 3375008 (+)
G14836 NA non-coding downstream 13553 3548776 ~ 3550158 (+)
G14856 NA non-coding downstream 47893 3583116 ~ 3584042 (+)
G14842 NA non-coding downstream 86355 3621578 ~ 3624630 (+)
G14873 NA non-coding downstream 97870 3633093 ~ 3633583 (+)
G14874 NA non-coding downstream 101632 3636855 ~ 3695392 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 1860194 1667762 ~ 1671167 (+)
G13051 NA other upstream 2486046 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 3039141 483853 ~ 488825 (+)
G12614 NA other upstream 3220257 309144 ~ 310941 (+)
G15794 NA other downstream 1525995 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 1751526 5279837 ~ 5287698 (+)
G15995 NA other downstream 2176662 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 3997349 7531541 ~ 7540586 (+)

Expression


Co-expression Network