XLOC_006838 (si:dkey-188i13.10)


Basic Information

Item Value
gene id XLOC_006838
gene name si:dkey-188i13.10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 37645572 ~ 37649595 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013155
CTCGATTCTCAGGAAACGGCCTGCATGTAAGTTTCGTTTTGTGAGTTCAACTCCTCGAAAGTATGCCGAAAGTATCTACCATTATTGGGATTGCAGCTGGAGCTGcTGGTGCCGTTGCTTTGACCCCGCTGGCGCTCGGCATGGTCGGGTTTTCTGTTGCTGGCATCACAGCGGGTTCTATGGCAGCTGGTATGATGTCCACAGCGGCCATCGCTAATGGTGGTGGTGTGGCTGCTGGAAGTGTAGTCGCTCTCCTCCAGTCAGCAGgtgctgctgGTTTGTCCTCAGCAGCAACAGCTGGTGTGGCATCTGTAGGTGGTGCTGCAGGGGGGCTATTAGGTGGAGCTGTTCATTTGTTGAAGAGGTTGAAGAAATGAGAAATGCACTCAAGCCTACAGCGTTTCTGCTCTTAAATGCTCACAGTCCACAGAcagttcaacacaatctcacagctaTTTGTAACTAAATTGATTTGTGGCTAATTGTCTGATGAATGTTGTATGATCTTATTTCTACATGGTCTCCTCATCTCCCTCAATAACTGTTTGGTTTTTGGGTGGGGTTTGTGGACACACCTCCTTGTTAAAAATCAGACGTTTTGAATGAAATTTTATAAATTCAAACTAATTTGCCTTTTCTAGAAGTTTattatgtttcctcatgagaacTATGTATGGAAGCATATCAGTAGGTATGCAGTcaattcattttgaaaatgtaaatgcaaaacaaCAATGCAGTATGTAAAAGTGCAATGTTCTATTTTAATTTGCATTGCGCATGATGCGCAATGGCGGGCGAGCAACTCAATGTAGCgtgatttacatttaatatttaataaaattctgaagaaaaaacg
>TCONS_00013156
GTATCTACCATTATTGGGATTGCAGCTGGAGCTGcTGGTGCCGTTGCTTTGACCCCGCTGGCGCTCGGCATGGTCGGGTTTTCTGTTGCTGGCATCACAGCGGGTTCTATGGCAGCTGGTATGATGTCCACAGCGGCCATCGCTAATGGTGGTGGTGTGGCTGCTGGAAGTGTAGTCGCTCTCCTCCAGTCAGCAGgtgctgctgGTTTGTCCTCAGCAGCAACAGCTGGTGTGGCATCTGTAGGTGGTGCTGCAGGGGGGCTATTAGGTGGAGCTGTTCATTTGTTGAAGAGGTTGAAGAAATGAGAAATGCACTCAAGCCTACAGCGTTTCTGCTCTTAAATGCTCACAGTCCACAGAcagttcaacacaatctcacagctaTTTGTAACTAAATTGATTTGTGGCTAATTGTCTGATGAATGTTGTATGATCTTATTTCTACATGGTCTCCTCATCTCCCTCAATAACTGTTTGGTTTTTGGGTGGGGTTTGTGGACACACCTCCTTGTTAAAAATCAGACGTTTTGAATGAAATTTTATAAATTCAAACTAATTTGCCTTTTCTAGAAGTTTattatgtttcctcatgagaacTATGTATGGAAGCATATCAGTAGGTATGCAGTcaattcattttgaaaatgtaaatgcaaaacaaCAATGCAGTATGTAAAAGTGCAATGTTCTATTTTAATTTGCATTGCGCATGATGCGCAATGGCGGGCGAGCAACTCAATGTAGCgtgatttacatttaatatttaataaaattctg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000075151

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013155 False 859 mRNA 0.43 4 37645572 37649595
TCONS_00013156 True 777 mRNA 0.43 3 37645583 37647209

Neighbor

gene id symbol gene type direction distance location
XLOC_006837 si:dkey-188i13.9 coding downstream 2671 37638758 ~ 37642901 (-)
XLOC_006836 NA coding downstream 8974 37632626 ~ 37636598 (-)
XLOC_006835 ifi46 coding downstream 14480 37623276 ~ 37631092 (-)
XLOC_006834 zgc:152791 coding downstream 25282 37617518 ~ 37620290 (-)
XLOC_006833 si:dkey-188i13.6 coding downstream 30543 37609458 ~ 37615029 (-)
XLOC_006839 si:dkey-188i13.11 coding upstream 1078 37650673 ~ 37656690 (-)
XLOC_006840 eys coding upstream 342563 37992158 ~ 38039871 (-)
XLOC_006841 CT027676.1 coding upstream 434482 38084077 ~ 38088627 (-)
XLOC_006842 NA coding upstream 540926 38190521 ~ 38195214 (-)
XLOC_006843 NA coding upstream 963630 38613225 ~ 38619719 (-)
XLOC_006471 BX537274.2 misc downstream 27380667 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 36819347 825904 ~ 826225 (-)
XLOC_006829 NA non-coding downstream 109787 37528161 ~ 37535785 (-)
XLOC_006819 AL845493.1 non-coding downstream 466856 37178602 ~ 37178716 (-)
XLOC_006817 NA non-coding downstream 535036 37110212 ~ 37110536 (-)
XLOC_006815 NA non-coding downstream 633336 37009812 ~ 37012236 (-)
XLOC_006846 BX323574.1 non-coding upstream 1203542 38853137 ~ 38853252 (-)
XLOC_006848 BX324188.2 non-coding upstream 1592960 39242555 ~ 39242672 (-)
XLOC_006850 NA non-coding upstream 1849997 39499592 ~ 39504493 (-)

Expression


Co-expression Network