G17475


Basic Information

Item Value
gene id G17475
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 8915870 ~ 8916107 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU19603
GTGTATTTGGGATACATAATATAGAGAATGAGAAGGTTGCGTCACAGCGTTTTCACTCGCGTTGCATTTCGGGAAGGCGTCGCCATATTAGCAGGACACGCTATCCGTTGCCATGGTTACTTTGACAGTGAGACCGAGAGAAATAGCGTGATATTTGTTTGCATTTTTGCGATATGCAGCAGTTTCTTGGAAAGAAATGGATAATGAGGAAGCGAAAGGAAAGGGGCTCTATCGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19603 True 238 lncRNA 0.45 1 8915870 8916107

Neighbor

gene id symbol gene type direction distance location
CI01000001_08841482_08845223 OLFML3A coding upstream 70237 8840862 ~ 8845633 (+)
CI01000001_08785318_08810381 FAM132A coding upstream 105489 8785318 ~ 8810381 (+)
CI01000001_08748236_08757869 NCKAP5L coding upstream 157867 8748236 ~ 8758003 (+)
CI01000001_08721737_08727450 KANSL2 coding upstream 188100 8721737 ~ 8727787 (+)
CI01000001_08714618_08721009 NA coding upstream 194688 8714618 ~ 8721182 (+)
CI01000001_08934325_08940532 KLHL21 coding downstream 17900 8934007 ~ 8941354 (+)
CI01000001_08950041_08960737 NA coding downstream 33934 8950041 ~ 8961071 (+)
CI01000001_08962231_08968219 CASP9 coding downstream 46124 8962231 ~ 8968227 (+)
CI01000001_08971649_08984224 NA coding downstream 54438 8970545 ~ 8984239 (+)
CI01000001_09039724_09045754 NA coding downstream 123617 9039724 ~ 9046115 (+)
G17474 NA non-coding upstream 269 8915278 ~ 8915601 (+)
G17473 NA non-coding upstream 744 8914591 ~ 8915126 (+)
G17469 NA non-coding upstream 3866 8911666 ~ 8912004 (+)
G17450 NA non-coding upstream 23757 8891865 ~ 8892113 (+)
G17373 NA non-coding upstream 60137 8846966 ~ 8855733 (+)
G17476 NA non-coding downstream 66 8916173 ~ 8916402 (+)
G17479 NA non-coding downstream 3386 8919493 ~ 8919700 (+)
G17483 NA non-coding downstream 7389 8923496 ~ 8923744 (+)
G17495 NA non-coding downstream 94811 9010918 ~ 9011130 (+)
G17359 NA non-coding downstream 112004 9028111 ~ 9028519 (+)
G17234 NA other upstream 883387 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1375284 7531541 ~ 7540586 (+)
G15995 NA other upstream 3200919 5711885 ~ 5714951 (+)
CI01000001_05279884_05287123 NA other upstream 3625914 5279837 ~ 5287698 (+)
G15794 NA other upstream 3851166 5061218 ~ 5064704 (+)
G17353 NA other downstream 299915 9216022 ~ 9228859 (+)
G17354 NA other downstream 318356 9234463 ~ 9240677 (+)
CI01000001_09435836_09436037 NA other downstream 502221 9435836 ~ 9436373 (+)
G18896 NA other downstream 1323793 10239900 ~ 10241492 (+)
G18873 NA other downstream 1341005 10223879 ~ 10260714 (+)

Expression


Co-expression Network