G19702


Basic Information

Item Value
gene id G19702
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 12552027 ~ 12552458 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU22129
GGACATAAAAAAACACATCATTTCTCAAAATATCTTCCTTTATGTTTTACAGTAGAAAGAAAGTCATGTGGTCACTTTCACACACATCAACGGAATATGGTCGTCAGTCCTGTATTTGAGTCCTTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCATTTATTACTCACCCTCATGCCGTTCCACACCTGTAAGACCTTCGTTAATCTTCAGAACGCAAATTAAGATATTTTTGATGAAATCCGATGGCTCAGTGGGGCCTGCATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATTAATGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCGACAAGAATATTTTTGGTGCACCAAAAAAAACCAAAATAACGACTTATATAGTGATGGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22129 True 432 lncRNA 0.35 1 12552027 12552458

Neighbor

gene id symbol gene type direction distance location
CI01000001_12503839_12514653 ASXL1 coding upstream 36699 12503528 ~ 12515328 (+)
CI01000001_12486765_12495297 DCJ11, DNAJC11A, DNAJC11 coding upstream 56509 12485546 ~ 12495518 (+)
CI01000001_12280407_12327837 NA coding upstream 224073 12278771 ~ 12327954 (+)
CI01000001_12088244_12091260 NA coding upstream 460533 12088167 ~ 12091494 (+)
CI01000001_12058281_12060612 NA coding upstream 490766 12057755 ~ 12061261 (+)
CI01000001_12556923_12557900 NPBWR2 coding downstream 3725 12556183 ~ 12558099 (+)
CI01000001_12568625_12571184 NA coding downstream 16076 12568534 ~ 12571943 (+)
CI01000001_12580225_12599311 NA coding downstream 27516 12579974 ~ 12599587 (+)
CI01000001_12602382_12613489 CABLES2A coding downstream 49503 12601961 ~ 12613938 (+)
CI01000001_12633655_12648702 NA coding downstream 80740 12633198 ~ 12649116 (+)
G19697 NA non-coding upstream 5647 12545950 ~ 12546380 (+)
G19673 NA non-coding upstream 13473 12522673 ~ 12538554 (+)
G19538 NA non-coding upstream 70622 12109563 ~ 12481405 (+)
G19621 NA non-coding upstream 182997 12305013 ~ 12369030 (+)
G19548 NA non-coding upstream 407885 12143620 ~ 12144142 (+)
G19704 NA non-coding downstream 2641 12555099 ~ 12555464 (+)
G19717 NA non-coding downstream 24747 12577205 ~ 12577419 (+)
G19718 NA non-coding downstream 25056 12577514 ~ 12577925 (+)
G19756 NA non-coding downstream 193532 12745990 ~ 12746308 (+)
CI01000001_12873759_12874041 NA non-coding downstream 194034 12873448 ~ 12874215 (+)
G19395 NA other upstream 870210 11681322 ~ 11681817 (+)
G19314 NA other upstream 993354 11501194 ~ 11558673 (+)
G19039 NA other upstream 1698044 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2012181 10538388 ~ 10539846 (+)
G18937 NA other upstream 2075638 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 960946 13514115 ~ 13517063 (+)

Expression


Co-expression Network