G19718


Basic Information

Item Value
gene id G19718
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 12577514 ~ 12577925 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU22145
TTATGATCTGCGCTGTGTATGAATACTTATCCACTTTTTCATGAGAAATGCTGTCCAAATGTCCTGTTTGTCATGATGACGTCTAAAGTCCCCGCCAAAGGAAGTAGTCCCTTTTAGCAATTTGTTAGCAACCGCCGTTTTTAAGACACAGTAATGGTTTAAAAAAAAAATCACAAGTGGGTTATAACTGGTGTGTTTTATGTCATAGATCAAAACGTGAAAATATTTAGAGGCTTTGTTAACCACAGACCTTATTTCAGGCGATTTAGCAAAAACCCATTCAAAAAACCCATAGGGTGATTTTAGGGCGATGGAACCGGAAGTCCTAAAATGCTAACTTGCTTCCGGGTTTTGCCTACAAAAACACGTCATCTCTGAGGTACTCTATTGCGCCTGAATGGTCAAATCATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22145 True 412 lncRNA 0.45 1 12577514 12577925

Neighbor

gene id symbol gene type direction distance location
CI01000001_12568625_12571184 NA coding upstream 5571 12568534 ~ 12571943 (+)
CI01000001_12556923_12557900 NPBWR2 coding upstream 19415 12556183 ~ 12558099 (+)
CI01000001_12503839_12514653 ASXL1 coding upstream 62186 12503528 ~ 12515328 (+)
CI01000001_12486765_12495297 DCJ11, DNAJC11A, DNAJC11 coding upstream 81996 12485546 ~ 12495518 (+)
CI01000001_12280407_12327837 NA coding upstream 249560 12278771 ~ 12327954 (+)
CI01000001_12580225_12599311 NA coding downstream 2049 12579974 ~ 12599587 (+)
CI01000001_12602382_12613489 CABLES2A coding downstream 24036 12601961 ~ 12613938 (+)
CI01000001_12633655_12648702 NA coding downstream 55273 12633198 ~ 12649116 (+)
CI01000001_12657571_12666609 NA coding downstream 79646 12657571 ~ 12667379 (+)
CI01000001_12718151_12726821 TBX18 coding downstream 139999 12717924 ~ 12727334 (+)
G19717 NA non-coding upstream 95 12577205 ~ 12577419 (+)
G19704 NA non-coding upstream 22050 12555099 ~ 12555464 (+)
G19702 NA non-coding upstream 25056 12552027 ~ 12552458 (+)
G19697 NA non-coding upstream 31134 12545950 ~ 12546380 (+)
G19673 NA non-coding upstream 38960 12522673 ~ 12538554 (+)
G19756 NA non-coding downstream 168065 12745990 ~ 12746308 (+)
CI01000001_12873759_12874041 NA non-coding downstream 168567 12873448 ~ 12874215 (+)
G19783 NA non-coding downstream 221709 12799634 ~ 12810711 (+)
G19787 NA non-coding downstream 227376 12805301 ~ 12883428 (+)
G19792 NA non-coding downstream 243681 12821606 ~ 12826051 (+)
G19395 NA other upstream 895697 11681322 ~ 11681817 (+)
G19314 NA other upstream 1018841 11501194 ~ 11558673 (+)
G19039 NA other upstream 1723531 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2037668 10538388 ~ 10539846 (+)
G18937 NA other upstream 2101125 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 935479 13514115 ~ 13517063 (+)

Expression


Co-expression Network