CI01000004_04123289_04123846


Basic Information

Item Value
gene id CI01000004_04123289_04123846
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4122624 ~ 4123963 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_04123289_04123846.mRNA
CTATATATACCCAACACTCTATTACCACAATTCATTCAAATCTCACTGCTGCTACTGTCAGGGTTCTCTCACTTCAGTCAGTTTATTCTTGGTTTGGTAACAGAGCTCTGACACTGCTATTGTCTTGTCATGGTGAGTGTGCAGTTCTGAGCTTGCTCGGGCCGTGATTTTTTTGTGTGCGGAGCAAGGTGTTCCAATCCCAGAACTTTGATTTAGTTTAGTTTCGGTTCTGCGTCGGGATTCGGACATTCATGCTCTGTGTGTTTGTCTTCTATTGTGATCGCACGGAATGGGCAGTATCCTACACAGTTGATGCAGTGAACGCAGTGCAGAGCTTCCGTGTTCTACATCAAGGCCCGTATGTATAAAACTTATCAGAAATGCTCTTAAGAATAGTCTTAAGTTTTGACTTAAGTGTCAAAAAATTCTTTGTAAAGAGTAGGACTTTTCTAAGATTAGGAGACTTTTATAAAGAAGCTAAAAGCAAATTTTAGCAAAGATTCTTAAGTGCTGACTTAAGTGTTGTGAACTAGTGAAGTTATTAAACATCATTTCGGGAGGAGTACGCCCATCTAATCTTCCAATTAATACCAAGGTATAAAACCAGCATCTTTCCTCTTCCTGTTGTTAGTTCTTTTGGCATTTGGCCCGCCCAAACCAGCAACATGACTGACTTCCAGGAAATTGAACTGTTCCCCTCTCCGACGACAAACTTTCTAATGTGCCAGAAACACCTGCACGTTTTTCCCCAAACAGGTTGGATCCTCCTTCACTTCACATTTCACCTGTTGATCGCCCAGGTTGCCAGTCTCACCGCTCCACAAGCCAGCTCAACACACCTCACTCGAGAAGACCTCTTTCTCCTCCTCCTTCTAGATCATCTCGGGGCTCGGCCGATCCTCGCCGTGATGCATCTCGTCCTTCATCATCATTATCCTCTTCAGCAGCAAGCCCTTCCATCCCTCCTCTTGAGAAATGGTCCGTCAACGTACTCAGGCAAGCGCTATCTAACGCGGGTATCCATTTCTCCCGGAGGAATTCAAAAGCGCAACTTCATAATCTGCTCGTGCGCTCTCACCAAAACTCTCAGCGTCCTCCCAGCACCGTGGAAGTTTCAAAACAAACAGCGGCACGATCCATACGGTTCGCCTCCAACCCGCCTCAGTTTCAGCCCGCACACAATAGTTCCATGGCCGCTCGTAATAGTTCCGCGGCCTCTCTGACCGTGACTGTTACCTTTCCTCCTCCCACAGGCGAGTCTCTCACAGCTTCCTGTCCACGCTTCCAATATTTCTCTTCCTCCTGTCTTTCAGTCTCAGTTGAATCCATCTAGCCATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_04123289_04123846.mRNA True 1340 mRNA 0.46 1 4122624 4123963

Neighbor

gene id symbol gene type direction distance location
CI01000004_04048829_04053849 NA coding upstream 68054 4045928 ~ 4054570 (+)
CI01000004_03934726_03935639 NA coding upstream 186754 3933685 ~ 3935870 (+)
CI01000004_03878083_03909016 NA coding upstream 213315 3878019 ~ 3909309 (+)
CI01000004_03814120_03839793 NA coding upstream 282817 3814051 ~ 3839807 (+)
CI01000004_03735876_03736152 NA coding upstream 385607 3735754 ~ 3737017 (+)
CI01000004_04172679_04173047 PBX1 coding downstream 47691 4171654 ~ 4174352 (+)
CI01000004_04231304_04239652 NA coding downstream 107248 4231211 ~ 4240123 (+)
CI01000004_04315741_04317415 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding downstream 190813 4314776 ~ 4317616 (+)
CI01000004_04400735_04404462 ELOVL1A coding downstream 276459 4400422 ~ 4404786 (+)
CI01000004_04412723_04413196 NA coding downstream 287638 4411601 ~ 4413196 (+)
G27027 NA non-coding upstream 23906 4098327 ~ 4098718 (+)
G27025 NA non-coding upstream 40309 4080971 ~ 4082315 (+)
G27024 NA non-coding upstream 44038 4078271 ~ 4078586 (+)
G27023 NA non-coding upstream 44839 4077566 ~ 4077785 (+)
G27022 NA non-coding upstream 45226 4077102 ~ 4077398 (+)
G27044 NA non-coding downstream 44083 4168046 ~ 4168249 (+)
G27133 NA non-coding downstream 197196 4321159 ~ 4321368 (+)
G27138 NA non-coding downstream 211082 4335045 ~ 4335330 (+)
G27146 NA non-coding downstream 231354 4355317 ~ 4355544 (+)
G27166 NA non-coding downstream 286481 4410444 ~ 4411305 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 570178 3550329 ~ 3553423 (+)
G26245 NA other upstream 600231 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1363686 2745885 ~ 2769135 (+)
G25992 NA other upstream 1385856 2736536 ~ 2736768 (+)
G25882 NA other upstream 1549575 2548075 ~ 2573049 (+)
G27805 NA other downstream 1248862 5372825 ~ 5373803 (+)
G28165 NA other downstream 1608626 5732589 ~ 5733001 (+)
G28302 NA other downstream 2346065 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2447257 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3530809 7654234 ~ 7656383 (+)

Expression


Co-expression Network