CI01000004_04231304_04239652


Basic Information

Item Value
gene id CI01000004_04231304_04239652
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4231211 ~ 4240123 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_04231304_04239652.mRNA
ATATAAATAAAGAAAGGACATCTAACATCTTTCATAGTGGCGCACAAAATCTTATCCTCTAAAAAAAACACAGTCAGTAGGGTAGAGTACACAATGTCACCAGCTGGCCTGACGACACAAGCCTCCGATGAGAGTTCTCCAGTCGATAAGGATTCGATGGCGGAGGTTTGGCTTCAGGTCGAGCTCGGTCAGGCCCTGTGTAAAAATACACGGCGAGGTCAGGAGTTCAGGCCGGCTCTGTCTGCTGCTGGCACACCGTACTGCCCCGCTTGTCAGCTGCTTGCCAGAGGAGGACTCATCACCACGGCATCCTCTCGCACGGCTGTCAACACGCCGACGCCACCATGCAACACGTGGTCCGTGCCGGGCAACTCGCAGCCGTGTCAATCTCTGCAAGATGGCCATAGGTTACGAAGAATTACAGGAGCCGTGTCATTTCCTGCTCTCTCAACACGTCTGCAGATGAAATATATTAGCAGAGAGAAAATGTATTGTTCCTGTCAAAGACACTGTGTCGTGTCTGAAAAGGAATTACGAGTTGCACTTAAAGCAGCAAGCTGAGGTGGCCGAGGTGACGACACAGTTTATTCAAAGTATAAAGTAAATCAAGGTTATTGTGAGCAGAAAAGGTTTATTTAAAAAAAAAAACAGAGAGCAACTGTTTCAACGAGACAAGCTCTCGGTCGGCTCCATGACCTCCACAGTCTGTTATGAAAGCTAAGACACCACTGTTCCACAGCACGCTACGCCATTTCAACAAAACAGACCTGCTACGGATTTAATAACCTCGCTTTTCTGGAATCCACCTGGGACTCTACGGCTGCAACAATGTAAAACCATGAACGAGGCTGACTCTTTATTAAAAAAAAATTTAAAAAGGGCCCGACAAAAATGGTGGCTGCTCTCGTTTGGGCGCTCTGCACTCAGCACATTTGCAGTAAATGTCACGGCGGAGGTTTGAGCCATTTTCTCTGTGGCGGCGGTGGATTTTTAGTGGTGTCTGTCTGTGCAGTGTGAAATTACACCCTCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_04231304_04239652.mRNA True 1032 mRNA 0.48 2 4231211 4240123

Neighbor

gene id symbol gene type direction distance location
CI01000004_04172679_04173047 PBX1 coding upstream 56859 4171654 ~ 4174352 (+)
CI01000004_04123289_04123846 NA coding upstream 107248 4122624 ~ 4123963 (+)
CI01000004_04048829_04053849 NA coding upstream 176641 4045928 ~ 4054570 (+)
CI01000004_03934726_03935639 NA coding upstream 295341 3933685 ~ 3935870 (+)
CI01000004_03878083_03909016 NA coding upstream 321902 3878019 ~ 3909309 (+)
CI01000004_04315741_04317415 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding downstream 74653 4314776 ~ 4317616 (+)
CI01000004_04400735_04404462 ELOVL1A coding downstream 160299 4400422 ~ 4404786 (+)
CI01000004_04412723_04413196 NA coding downstream 171478 4411601 ~ 4413196 (+)
CI01000004_04414110_04428551 CC2D1B coding downstream 173987 4414110 ~ 4428551 (+)
CI01000004_04498877_04532504 CLCN2, CLCN2A coding downstream 258754 4498877 ~ 4533086 (+)
G27044 NA non-coding upstream 62962 4168046 ~ 4168249 (+)
G27027 NA non-coding upstream 132493 4098327 ~ 4098718 (+)
G27025 NA non-coding upstream 148896 4080971 ~ 4082315 (+)
G27024 NA non-coding upstream 152625 4078271 ~ 4078586 (+)
G27023 NA non-coding upstream 153426 4077566 ~ 4077785 (+)
G27133 NA non-coding downstream 81036 4321159 ~ 4321368 (+)
G27138 NA non-coding downstream 94922 4335045 ~ 4335330 (+)
G27146 NA non-coding downstream 115194 4355317 ~ 4355544 (+)
G27166 NA non-coding downstream 170321 4410444 ~ 4411305 (+)
G27159 NA non-coding downstream 196058 4436181 ~ 4436502 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 678765 3550329 ~ 3553423 (+)
G26245 NA other upstream 708818 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1472273 2745885 ~ 2769135 (+)
G25992 NA other upstream 1494443 2736536 ~ 2736768 (+)
G25882 NA other upstream 1658162 2548075 ~ 2573049 (+)
G27805 NA other downstream 1132702 5372825 ~ 5373803 (+)
G28165 NA other downstream 1492466 5732589 ~ 5733001 (+)
G28302 NA other downstream 2229905 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2331097 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3414649 7654234 ~ 7656383 (+)

Expression


Co-expression Network