CI01000004_08015521_08017006


Basic Information

Item Value
gene id CI01000004_08015521_08017006
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8015297 ~ 8017014 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_08015521_08017006.mRNA
CCATATATGGGAGTTAACTTATAAGAATGTCAGAGAAATGGCTAAAAAAAAGAAACACCCCTCCAAATGAAAGGGAAATCACATTTTTGCCTATCCATGAACAACAACAGGAAGAAAAAGCAGAAGAGTGATAGAAGAGCTTCCTGTAAAATAAACACTAGTACAAAAAATGGGGTAGAGCACTGAAATGTAAAACAGCCTCATGATCCAGTTAACTCATTCATATGTATGGAATTACAGAGCTCATCTGCTCCATCAAAATCAGACTTTCCAAACTCATCCATAACAGCTGCTATATTCCAAGAAACCATGGAAACATAAAAGTCACAGGCATAAAATTGGAGGGAAAACAAGTTGTCAGTGATAAATCACTATCATGGTCAATGCAAGAGGTAAAACCATCATGTGGATGTGTGGAAAAGCCAATGAAGTCGAAATTTTATTTCAATGGAAATTCCAGGCAACGCCAGAATAATGGCAGCTCAGCTTTCCAGTCAATTTCCCAGTTTTCCACATGCGGAAAAACATTCAAAAGCAGAGATAAGGCAGAATTCTTCCCAAAGAAAAAACCTTGGCATCACAGATCCGCTCCTTTACTGAGTCTGCCAAGTCACGACACCCCACTGTCTTGTCCACTGTAATACGGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_08015521_08017006.mRNA True 649 mRNA 0.39 3 8015297 8017014

Neighbor

gene id symbol gene type direction distance location
CI01000004_07993172_07997413 GYG1A coding upstream 17884 7993172 ~ 7997413 (+)
CI01000004_07987968_07989044 AGTR1A coding upstream 25768 7985367 ~ 7989529 (+)
CI01000004_07971396_07974484 NA coding upstream 40794 7971324 ~ 7974503 (+)
CI01000004_07962260_07967751 RAB3A.L, RAB3A, RAB3AA, RAB3AB coding upstream 46690 7962260 ~ 7968607 (+)
CI01000004_07954612_07959231 PDE4C, PDE4CA coding upstream 55571 7954236 ~ 7959726 (+)
CI01000004_08081989_08097935 STAG1, STAG1A, STAG1B coding downstream 64690 8081704 ~ 8098754 (+)
CI01000004_08108419_08111331 MSL2A coding downstream 90712 8107726 ~ 8111666 (+)
CI01000004_08177656_08183324 PPP2R3A coding downstream 160551 8177565 ~ 8183595 (+)
CI01000004_08200962_08208539 PPP2R3A coding downstream 182357 8199371 ~ 8210704 (+)
CI01000004_08243282_08245264 NA coding downstream 225965 8242979 ~ 8245369 (+)
G28797 NA non-coding upstream 31520 7983481 ~ 7983777 (+)
G28791 NA non-coding upstream 187615 7827368 ~ 7827682 (+)
G28790 NA non-coding upstream 193280 7821817 ~ 7822017 (+)
G28784 NA non-coding upstream 210644 7804266 ~ 7804653 (+)
G28780 NA non-coding upstream 248908 7765563 ~ 7766389 (+)
G28800 NA non-coding downstream 8477 8025491 ~ 8025898 (+)
G28801 NA non-coding downstream 11236 8028250 ~ 8033712 (+)
G28819 NA non-coding downstream 260188 8277202 ~ 8284097 (+)
G28834 NA non-coding downstream 348681 8365695 ~ 8365921 (+)
G28835 NA non-coding downstream 351847 8368861 ~ 8369073 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 358914 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 1440876 6570771 ~ 6572667 (+)
G28302 NA other upstream 1513210 6470028 ~ 6502087 (+)
G28165 NA other upstream 2282296 5732589 ~ 5733001 (+)
G27805 NA other upstream 2641494 5372825 ~ 5373803 (+)
CI01000004_08414451_08436256 NA other downstream 416691 8414316 ~ 8439933 (+)
G28859 NA other downstream 582221 8599235 ~ 8599603 (+)
CI01000004_08976512_08980033 TTPA other downstream 959424 8976254 ~ 8980984 (+)
G30797 NA other downstream 2480362 10497376 ~ 10497788 (+)
G31710 NA other downstream 3620237 11637251 ~ 11642400 (+)

Expression


Co-expression Network