G62691


Basic Information

Item Value
gene id G62691
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10233598 ~ 10292220 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU92793
acttggACATTTTGCTTCATCTACTGTGGGTTGATGTCGTTATTGTTGTAGGAGTTTGAGGGGTTGTTTTTATGCCCAGAGAGATATTTTAAATGGCCTCGCAGGCCCCTCATCAGCTGCATGGGCTAACGCTTAGCCACAGGAAACGCAGACAGCTGAACAAAAAACACACGCATAAACACCCATATAATCAGAACATGACAAAATCAACACATATCAGAGCTTTACTAGGTACcctcacaaatacacacatacaaccGATATGATGTAAAATCCACACTCTCTGGTCGCTTTCGCTAACCTTTTATAATGGCTTCGCATACACATTCTATTGAGTTGACCATAGTAATGCCCAGAATACATACGACATGACTTGTTTTAATGGTGCtgatatgaaaattatatgGAAATCtctatatatgaattatatataactGTGCATGGTGCTTTCAAAAGTAAAATCACAAGAATTAAGCTCAAACGACCACCGTATCGCTGACATGGGCGCATGGCAGATATTCTTAGAATTAGCTCTGAAGCAAAATGCTCCCCGACTTCTCCTTAACAAACCCCCTTTGAGCAAAGAGCCAATGACACAGATGGATTTTACCTTTGTACTACATGGGTTTGACTTTTATCCAACAATCCCTCTTCTACTTTGCAcgatattttataaaacatattatgtGCCTTGCCTTTAGTTAAGAACGATAATGCGTAATTTTAAAGGAGtcgattaatttttttttttttttttttttttttttttttttttTTTTGCTCttgctcattttatttgaatattacaaACTTGTCAACCACCAGTCTAACACGAATTCTTCATGGCACTGAGAGATAGGGACAAAGTGATGAAAAACAATTCTTAACACCAGGAGACCATAAAACTGTAGTAGAAATATATTAGAAGGCACTTGTTTTTAATGAGcttgttttaatgaaacaatTCTGTTTCTCAAACATTTAACAGAACTGAAGCCTTTTATAGTGTTCTTACATGTTGGTAATATACCAACAAAATCTGGAAGTCTAAGACAACCATTTAGCTTGGCTATTTCAAGTGAAGTTtagttattaaatgtatttttaaacattacacaGCAAACTTCATAACTATAGCTAGATCTGTGCATTTTGGAAATCACATTGCTATCAGGAATGCTGGTAGTTAACACCACAATAACCTAAAAGAGGCTTTCCACATCTCCCATTTCCACCACGACGGTCTTAAGCTGAGAGTAGTACTCGATGGTCACTTGTCCGTTCTCCCTTCCAAACCC
>TU92794
CCACAggaataacattaaaatatatgtaacaaagttttttttttttttttttTTTTGCTCttgctcattttatttgaatattacaaACTTGTCAACCACCAGTCTAACACGAATTCTTCATGGCACTGAGAGATAGGGACAAAGTGATGAAAAACAATTCTTAACACCAGGAGACCATAAAACTGTAGTAGAAATATATTAGAAGGCACTTGTTTTTAATGAGcttgttttaatgaaacaatTCTGTTTCTCAAACATTTAACAGAACTGAAGCCTTTTATAGTGTTCTTACATGTTGGTAATATACCAACAAAATCTGGAAGTCTAAGACAACCATTTAGCTTGGCTATTTCAAGTGAAGTTtagttattaaatgtatttttaaacattacacaGCAAACTTCATAACTATAGCTAGATCTGTGCATTTTGGAAATCACATTGCTATCAGGAATGCTGGTAGTTAACACCACAATAACCTAAAAGAGGCTTTCCACATCTCCCATTTCCACCACGACGGTCTTAAGCTGAGAGTAGTACTCGATGGTCACTTGTCCGTTCTCCCTTCCAAACCC

Function

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92793 True 1298 lncRNA 0.36 2 10233598 10292220
TU92794 False 575 lncRNA 0.34 2 10262789 10292220

Neighbor

gene id symbol gene type direction distance location
nfic nfic,LOC107585880,LOC107745803,LOC107548967,LOC107695213 coding upstream 1799 10152268 ~ 10231799 (+)
mfsd12b mfsd12,mfsd12b,LOC107585878,LOC107695260,LOC107745804 coding upstream 101353 10126276 ~ 10132245 (+)
csnk1g2b LOC107745806,LOC107695259,LOC106925954,LOC106953035,LOC103468226,LOC107676849,LOC107585879 coding upstream 108998 10099845 ~ 10124600 (+)
zgc:101100 zgc:101100,LOC107677009,LOC107731167,LOC107745807,LOC107585932,LOC107695257,LOC107549997 coding upstream 134963 10096006 ~ 10098635 (+)
rexo1 rexo1,LOC107585876,LOC107731267,LOC107745805,LOC107548912,LOC107695255 coding upstream 144287 10079286 ~ 10089311 (+)
uck2a uck2a,LOC107731246,LOC107668082,LOC107585889,LOC107745792,LOC107695269,LOC107549113,LOC106584056 coding downstream 10072 10302292 ~ 10313338 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding downstream 22418 10314638 ~ 10316153 (+)
porcn porcn,LOC107668076,LOC107731151,LOC107585894,LOC107745789,LOC108441640 coding downstream 28472 10320692 ~ 10326851 (+)
spryd4 spryd4,LOC107731260,LOC107585895,LOC107585896,LOC107549155,LOC107745790,LOC107668079,LOC107695231 coding downstream 35080 10327300 ~ 10329779 (+)
cry3a cry1ba,LOC107668038,LOC108441644,LOC108265656 coding downstream 78107 10370327 ~ 10386088 (+)
G62704 NA non-coding upstream 78996 10154344 ~ 10154602 (+)
G62703 NA non-coding upstream 82961 10149900 ~ 10150637 (+)
G62690 NA non-coding upstream 84418 10148916 ~ 10149180 (+)
G62688 NA non-coding upstream 86516 10146867 ~ 10147082 (+)
G62686 NA non-coding upstream 91714 10141522 ~ 10141884 (+)
G62732 LOC107731259 non-coding downstream 45885 10338105 ~ 10338669 (+)
G62733 NA non-coding downstream 49733 10341953 ~ 10342203 (+)
G62739 NA non-coding downstream 129633 10421853 ~ 10422562 (+)
G62693 NA non-coding downstream 153458 10445678 ~ 10484599 (+)
G62743 NA non-coding downstream 234759 10526979 ~ 10530687 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other upstream 527959 9704481 ~ 9705639 (+)
smim15 smim15,LOC107700545 other upstream 1755267 8477171 ~ 8478331 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other upstream 2704512 7306119 ~ 7529086 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 3383887 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 3467055 6756105 ~ 6766543 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 56694 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 139582 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 243923 10536143 ~ 10551791 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 900504 11192724 ~ 11197803 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other downstream 1002585 11294805 ~ 11311433 (+)

Expression


Co-expression Network