mfsd12b (mfsd12,mfsd12b,LOC107585878,LOC107695260,LOC107745804)


Basic Information

Item Value
gene id mfsd12b
gene name mfsd12,mfsd12b,LOC107585878,LOC107695260,LOC107745804
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10126276 ~ 10132245 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247465.1
ATAGTGTGGGTGTGAGAAGGAGAATTAAAACCGAAAACGGGCACTGCTAGACGCAAACAATTAGTGGGAGCAaccattttacttttacttgaaAACTACAGCATTTCGGATCCTTTTCAATGGGATGCAGGGTTCGGTTTAGTCGTTTGACTTATAGCAGCGCTTAACAGAGTCGAGATTTGATTTCTTTACGTTCACTCACGATGTCCGATCAGCCGGTAGCATTACCTGTGTGCAGGCGCCTGACGTACGCCGTGGGACACTTCTTCAACGACCTCTGCGCCTCTATGTGGTTCACCTACTTACTGGTGTATTATCACTCGGTTCTCGGGTTCAGGGACACGAACGCAGGTGCGCTGCTGCTGCTCGGTCAGATAGCGGACGGGATCTGCACTCCGCTCATCGGTTACGAATCGGATCGGACGGCAGGATGCGGAAAGTACGGGAAAAGAAAGAGCTGGCATTTAGTGGGAACAATAAGCGTGTTTGCCTCCTTCCCGTTCATATTCAATCCCTGCATTGGATGTGATGAGAAAACCCCACAGACCACCGGACTGATTTACGCCATCCCATTCATCATTATCTTCCAGTTCGGCTGGGCTGCTACCCAGATATCCCACCTGTCGCTCATTCCTGAACTGGTCACATGTGAGCACGCCAAAGTGGAGCTAACATCATACCGGTATGCCTTCACAGTGGTGGCAAACATTGCGGTATATGCTGTGGCGTGGCTCTTGTTCCACTTCCAATCCCAACATACAGAAGACCCATCGATTTCCCAGAGTCTGGGCTGGGTTGATGTTCCCACATTCAGATATCTGGCACTCATAATATGGGCCATTGGTAGTGTTACCTCTGTCATCTTTCACCTGGGCACTAAGGAGGAAGGAGTCCAGCCTCAGGAGAGTGAAGAGACTGGGAAATCCCAGACTTCCATCCCCGGCTCTTCCCAGTTCTCCGGACCCCTGCTCCTGTGGAAACACTGGCTCGTTGAGACTGCCTTCTATCAGGTTGCTTTACTATATATGTGCACGAGACTGATTGTGAATTTGTCCCAAACATACATCCCAATGTATCTGACCAACTCCTTATCACTTCCAAAGaattaCATTGCAACTATTCCGCTGGTCATGTACGTCAGTGGGCTTGTGTCTTCTCTGGTTATGAAGCCTGTTAACAAATGGATTGGGACCTCTATGGCCTATTTTATAGGTCTTGTGCCCGTAATGGTGTTTTCCTTTTGGGTTTTGGTGGACACAGACATGGGCACACGGGTTTATGGAGCCGCCGTGCTGTTGGGAGCTGGATCTGCCGTCATTCTGGTCATGTCGCTGTCCATGACTGCCAAACTCATCGGCGACCAAAGTcaaaGTGGTGCGTTCGTGTATGGTGCAATGAGCTTCACAGATAAGGTGGCAAACGGAGTTGGAGTGATGATAATACAAGCTTTACATCCCTGTCACACACTGGACTCTGACTGCAAATGGTTTTACCGCACTGTCATGGTGATCGTCACCGGCGGTGTGGCTGGCGTCGCAGCTCTGTGTCTCTCTTCCCTTCTCATCTGGCCCATCGCTATTCGCCGACGTCTCGCGGTCATCACGGGGCTGATGGGTACACATGACGATGAGACGAACGGCCGTGAGATCAATGGTATACTGAACTGACAGGTGtgttaaaaacttaaaacttgGAAAAAAACACTCAACATTCCGTGAAAGACTGGGCCGCGCTGCAGAGGAAACACTATGATTCCATTTGTATCTAACCAAGAACaaggaagagaagaaaatcTGCTGCGCTGTGGTCACGAGTTCTTGCCTCAGCACTTCGGGGATGCGAGTTTCAGCATAGTTCTTTACGCTGTCAACGGGCTCTTTGTGTGACGTTTGAAAATATGATCTCAGGTCTGTCACATGGAGTGACAGCTCGAACAATAATACGGCACATTCAAGACGAGGAAGTAACTCTGCTGAAGATTTCCCATACTTTTCTGAGGATTCCAACTTGAAATGAAAAACGCATCTAGTCTGTGTGATaactttttaattgcaatacAGAAACGGACCGTTCTCGAAAGTTTTGCAGACGTTTTTTTATGCAGAGAGTCTTGCCGGGAAGTTGGAATAGCACAAATATGTTTGCAGTAAAGCTCGTTCAGGCGGTTATGCCTGTACTGTTTTGAAGCGGTACACGTGATACCTGTATGAGAGATGTCGCAACTTGGCACTGACAACGGAAAACCGGCTAGTTGTCGTGTTAATACTGATTTGAGATTCCCTGGAACTTGTTAAAGTTTGTGGCAGTTACGGTTTTTATCCACTAGAGGGAAACATGTAAAGGAGCTTCGTGGCACTGCAGTGAATTTTGGAAATTCACAAAGTAGAAAAAGAACTTCATTTTCCCGTTGTCATCCACGATGCCcattaattattatgattattattcatttgattttaatcaAAGAAAGGAAGACTGAGATTTATTACTGTTGTAAATTACAGTTGTACTGTAAAATTCACAGAGCTCCCTCGGGTCTATGCGTGATTTGATTTGTgtcattaaatgtaagtacactTTATACTAAAAAAATCTACTTGAAATGCCCCAGagattttaagttaataatttaacagcacATTAACATCAATACttattactgattattattttagctcTGTAAAAAGAAAGAGTGACATTTAGTACTGTTGTAAATTACAGTTAagctgtcaaataaaaaaaaagattgcattCTTTAAAACTACAAGTAATagttaaaatactaatattcatgtttaattatttaattatttttttggggCAGAATACTAATGAAACAcagtttatgtatatgtgttccGTGGTTTgacagaatataaataaataaaataatctccaaca

Function

symbol description
mfsd12b Orthologous to human MFSD12 (major facilitator superfamily domain containing 12).
mfsd12 Enables cysteine transmembrane transporter activity. Involved in cysteine transmembrane transport; pigment metabolic process involved in pigmentation; and regulation of melanin biosynthetic process. Located in lysosome and melanosome. Part of late endosome.

NR:

description
PREDICTED: major facilitator superfamily domain-containing protein 12 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247465.1 True 2901 mRNA 0.44 10 10126276 10132245

Neighbor

gene id symbol gene type direction distance location
csnk1g2b LOC107745806,LOC107695259,LOC106925954,LOC106953035,LOC103468226,LOC107676849,LOC107585879 coding upstream 1676 10099845 ~ 10124600 (+)
zgc:101100 zgc:101100,LOC107677009,LOC107731167,LOC107745807,LOC107585932,LOC107695257,LOC107549997 coding upstream 27641 10096006 ~ 10098635 (+)
rexo1 rexo1,LOC107585876,LOC107731267,LOC107745805,LOC107548912,LOC107695255 coding upstream 36965 10079286 ~ 10089311 (+)
mknk2b mknk2b,mknk2,LOC107585877,LOC107731184,LOC107695256 coding upstream 49293 10063745 ~ 10076983 (+)
mob3a LOC107585875,LOC103368804,LOC107695254,LOC104921817,LOC107731185,LOC103137270,LOC101067073,LOC100699828 coding upstream 67333 10054080 ~ 10058943 (+)
nfic nfic,LOC107585880,LOC107745803,LOC107548967,LOC107695213 coding downstream 20023 10152268 ~ 10231799 (+)
fzr1a fzr1,fzr1a,LOC105904033,LOC105895242 coding downstream 127503 10259748 ~ 10264771 (+)
LOC122350469 NA coding downstream 140587 10272832 ~ 10279601 (+)
uck2a uck2a,LOC107731246,LOC107668082,LOC107585889,LOC107745792,LOC107695269,LOC107549113,LOC106584056 coding downstream 170047 10302292 ~ 10313338 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding downstream 182393 10314638 ~ 10316153 (+)
G62631 NA non-coding upstream 128792 9995571 ~ 9997484 (+)
G62613 NA non-coding upstream 144802 9980621 ~ 9981474 (+)
G62574 NA non-coding upstream 395265 9730777 ~ 9731011 (+)
G62573 NA non-coding upstream 397502 9728065 ~ 9728774 (+)
G62490 NA non-coding upstream 413763 9712203 ~ 9712513 (+)
G62685 NA non-coding downstream 4410 10136655 ~ 10137222 (+)
G62684 NA non-coding downstream 5078 10137323 ~ 10139265 (+)
G62686 NA non-coding downstream 9277 10141522 ~ 10141884 (+)
G62688 NA non-coding downstream 14622 10146867 ~ 10147082 (+)
G62690 NA non-coding downstream 16671 10148916 ~ 10149180 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other upstream 420637 9704481 ~ 9705639 (+)
smim15 smim15,LOC107700545 other upstream 1647945 8477171 ~ 8478331 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other upstream 2597190 7306119 ~ 7529086 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 3276565 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 3359733 6756105 ~ 6766543 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 216669 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 299557 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 403898 10536143 ~ 10551791 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 1060479 11192724 ~ 11197803 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other downstream 1162560 11294805 ~ 11311433 (+)

Expression


Co-expression Network