fzr1a (fzr1,fzr1a,LOC105904033,LOC105895242)


Basic Information

Item Value
gene id fzr1a
gene name fzr1,fzr1a,LOC105904033,LOC105895242
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10259748 ~ 10264771 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247661.1
TTTAACCCAGTCCCCATGATTCCTTGCGGTGCCATCGATAACAACAGCCTCGATTTGCAAACAACATCGAGCGGCTTATGTTATATCCATTATCAATATATTCTCCGTTTTTCAAGGTTTACACTCGACGTGTTTGTTTATGATAAGGTTCTGCTGATCGGATCATAAATTCACCGAATATCGTTGTCAAGGCACCGTGTCCCTGGATCTCCACATTCCCAGATTTCTGAATCACATCCATGGATCAGGACTATGAACGCCGGTTACTGCGGCAGATCAATGTCCAGAATGACAACACCAGCCCTATGaAAGTAAGAGATGTGATCTGTCATCTGACCCCCACCCCTGAGTCGCCGCTGTCATCACCAAGCAAGCATGGCGATAGATTCATACCCTCTCGGGCTGGAGCTAACTGGAGCATCAACTTCCACAGAATAAATgaaaatgaaaagtcGCCAAGccagaataaaaaaaccaaaGATGCAACATCAGATACTGGCAAAGCGGACGGCTTGGCGTATTCTGCCCTGCTGAAGAATGAGTTGCTTGGGGCTGGGATTGAGAAGGTTTTGGATCCTCAAACAGAAGATAGAAGACTACAGCCCTCCACACCCGAGAGGAGAAGCCTCTTTAGTTACTCGCTCAGTGCCAAAAGATCCACACCTGATGATAACAGTGTTTCCCCGTACTCCCTCTCCCCTGTTAGCAGCAAAAGCCAGAAGCTGCTGCGGTCGCCAAGGAAACCTACGCGGAAAATTTCTAAGATTCCTTTTAAAGTGCTAGATGCACCGGAGCTACAAGATGACTTCTACCTCAACTTAGTGGACTGGTCCTCTTTAAATGTGCTCAGTGTTGGACTGGGGACTTGTGTTTACCTTTGGAGTGCCTGCACCAGTCAAgTAACGCGACTATGTGACCTATCAGTGGAGGGCGATTCAGTCACGTCTGTGGGCTGGTCGGAGAGAGGCAATCTTGTTGCTGTGGGTACACACAAAGGCTTTGTACAAATCTGGGACGCTACTGCCGGCAAAAAGCTGTTTGCTTTGGAGGGACACACAGCAAGAGTTGGTGCATTGGCCTGGAATGCAGATCAGCTGTCATCGGGCAGCCGGGACCGCATGATCCTCCAGAGAGATATCAGGACGCCCCCTCTGCAGTCAGAGCGCAGGCTGCAGGGTCACAGACAAGAGGTCTGCGGACTCAAGTGGAGCACTGACCATCAACTGCTGGCCTCTGGGGGAAATGACAACAAGCTGTTAGTGTGGAATCACTCGAGCGTGTTACCCATGCAGCAGTACACAGAACACCTGGCCGCGGTGAAAGCCATCGCCTGGTCTCCTCACCAGCACGGGCTGCTGGCCTCTGGAGGTGGAACGGCTGACCGCTGCATCCGCTTCTGGAACACTCTTACAGCGCAGCCACTGCAGTGTATCGACACAGGCTCACAAGTCTGCAACCTGGCCTGGTCCAAACACACCAACGAACTGGTCAGCACACACGGTTACTCTCAGAATCAGATCCTTGTGTGGAAATACCCCTCTCTTACTCAAGTAGCCAAATTGACTGGCCACTCATATAGGGTGCTCTATCTGGCCATGTCTCCCGATGGAGAGGCGATAGTGACTGGTGCAGGTGACGAAACTCTGCGTTTTTGGAATGTATTTAGTAAAACACGATCAACAAAGgaATCTGTGTCAGTTTTAAACCTCTTCACCAGAATACGATAATTGGGCCGCTAAAGCAAGATTAAGTCTTTATAGCATATCTATGTCATCAATCACTTGCAGTAGACtggacataaaagaaaaaaaagaacaagagcGAAAGAGCGAGATCCACACCAAAAGATCTACGTCTCATCTTCAACATTTTTTACCCCTCCCctgacatttcatttttaagtttaaatgatatgtttactttttatgtgTACAGTTCAGTTGATGATTTTATGTGTGATTGTTTTTGGTTACAGAGAAGTGTCTATGTATGACATGTTATCCAAGCCTTAAGCCAGAAACAATGCCATTGAATCAGGGTGTAAAGAAATTTAGCCATTGTGACACAGCTGCCTCTGGAATCATTTGTAAAGCATTCTAATGCGTGATCTTTTGATTGTGAgagtgaaaaaaatgtatatgaaagaaaattcagtttttaactTCAGTTGCTTAAAATTGATATTGAGTATTATAAAacaccctgaaaaaaaaatggtgcttttgtcatttcttGTGGAGTATGAATTTGCAAGTAGACAAAATGAACTTGGAAAGTTTTTTGCAAACAAGTTTTCTAAACTGGGACATGTGAGTTAAATCATGAAAAGATATAATTGTCAgactaaaattatataaattactcTGATACGTTTagatacatttaatgcattcctgttgaataaaaatatcaaaattgacAGTAAGAGACCGGTGCAAAAAAACTCCAATAAATACCTTTCACAa

Function

symbol description
fzr1a Predicted to enable anaphase-promoting complex binding activity and ubiquitin ligase activator activity. Predicted to be involved in anaphase-promoting complex-dependent catabolic process and positive regulation of anaphase-promoting complex-dependent catabolic process. Predicted to act upstream of or within cell division and positive regulation of ubiquitin protein ligase activity. Predicted to be part of anaphase-promoting complex. Orthologous to human FZR1 (fizzy and cell division cycle 20 related 1).
fzr1 Predicted to enable anaphase-promoting complex binding activity and ubiquitin ligase activator activity. Involved in anaphase-promoting complex-dependent catabolic process; mitotic G2 DNA damage checkpoint signaling; and positive regulation of protein metabolic process. Located in nuclear membrane and nucleoplasm. Colocalizes with anaphase-promoting complex.

NR:

description
PREDICTED: fizzy-related protein homolog isoform X1

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0051301 cell division biological_process

KEGG:

id description
K03364 CDH1, FZR1; cell division cycle 20-like protein 1, cofactor of APC complex

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247661.1 True 2465 mRNA 0.45 14 10259748 10264771

Neighbor

gene id symbol gene type direction distance location
nfic nfic,LOC107585880,LOC107745803,LOC107548967,LOC107695213 coding upstream 27949 10152268 ~ 10231799 (+)
mfsd12b mfsd12,mfsd12b,LOC107585878,LOC107695260,LOC107745804 coding upstream 127503 10126276 ~ 10132245 (+)
csnk1g2b LOC107745806,LOC107695259,LOC106925954,LOC106953035,LOC103468226,LOC107676849,LOC107585879 coding upstream 135148 10099845 ~ 10124600 (+)
zgc:101100 zgc:101100,LOC107677009,LOC107731167,LOC107745807,LOC107585932,LOC107695257,LOC107549997 coding upstream 161113 10096006 ~ 10098635 (+)
rexo1 rexo1,LOC107585876,LOC107731267,LOC107745805,LOC107548912,LOC107695255 coding upstream 170437 10079286 ~ 10089311 (+)
LOC122350469 NA coding downstream 8061 10272832 ~ 10279601 (+)
uck2a uck2a,LOC107731246,LOC107668082,LOC107585889,LOC107745792,LOC107695269,LOC107549113,LOC106584056 coding downstream 37521 10302292 ~ 10313338 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding downstream 49867 10314638 ~ 10316153 (+)
porcn porcn,LOC107668076,LOC107731151,LOC107585894,LOC107745789,LOC108441640 coding downstream 55921 10320692 ~ 10326851 (+)
spryd4 spryd4,LOC107731260,LOC107585895,LOC107585896,LOC107549155,LOC107745790,LOC107668079,LOC107695231 coding downstream 62529 10327300 ~ 10329779 (+)
G62697 NA non-coding upstream 18621 10235180 ~ 10241127 (+)
G62704 NA non-coding upstream 105146 10154344 ~ 10154602 (+)
G62703 NA non-coding upstream 109111 10149900 ~ 10150637 (+)
G62690 NA non-coding upstream 110568 10148916 ~ 10149180 (+)
G62688 NA non-coding upstream 112666 10146867 ~ 10147082 (+)
G62732 LOC107731259 non-coding downstream 73334 10338105 ~ 10338669 (+)
G62733 NA non-coding downstream 77182 10341953 ~ 10342203 (+)
G62739 NA non-coding downstream 157082 10421853 ~ 10422562 (+)
G62693 NA non-coding downstream 180907 10445678 ~ 10484599 (+)
G62743 NA non-coding downstream 262208 10526979 ~ 10530687 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other upstream 554109 9704481 ~ 9705639 (+)
smim15 smim15,LOC107700545 other upstream 1781417 8477171 ~ 8478331 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other upstream 2730662 7306119 ~ 7529086 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 3410037 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 3493205 6756105 ~ 6766543 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 84143 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 167031 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 271372 10536143 ~ 10551791 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 927953 11192724 ~ 11197803 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other downstream 1030034 11294805 ~ 11311433 (+)

Expression


Co-expression Network