uck2a (uck2a,LOC107731246,LOC107668082,LOC107585889,LOC107745792,LOC107695269,LOC107549113,LOC106584056)


Basic Information

Item Value
gene id uck2a
gene name uck2a,LOC107731246,LOC107668082,LOC107585889,LOC107745792,LOC107695269,LOC107549113,LOC106584056
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10302292 ~ 10313338 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246942.1
CAATTGAAAGGAAGGGGAGGAGGAGCGCCGCCGCTCGCCGTGGTTAAAGCAGTACAGAGCTCAGTGTGCGCACTGACAGCATGGCAGGAGACAGCGACAGCAAGTTGGACAATCAAGCCGAAAATGAGCATGTTGTCAGGCAACCTTTCCTCATCGGGGTAGCCGGCGGCACTGCCAGCGGCAAGtcATCAGTTTGTGGGAAGATCATGGAGCTTCTTGGCCAGAATAAGATCGACCATCATCAGAGGCAGGTGGCCATCCTCAGTCAGGATAGTTTCTACAGGGTATTAACCTCTGAACAGAAGGCCAAGGCTCTAAAAGGACAATTTAACTTTGACCATCCAGATGCGTTTGATAATGAGTTGATAGTACAAACCCTTTGTGAAATCATGGAGGGGAGAACTGTCCAGATTCCCGTCTACGACTTCGTTACCCACTCAAGGAAAGAAGAGACGGTCACTGTTTATCCAGCAGATGTAGTTTTATTTGAAGGCATTCTTATGTTTTATTCGCAAGAAATCCGAGATCTCTTTCAAATGAAGCTGTTTGTGGATACGGATGCAGATACACGTCTGTCACGCAGAGTTCTGAGAGACATCAGTGAGAGAGGTCGTGACCTAGAGCAAGTGCTAAGCcaatatataacatttgttAAGCCTGCCTTCGAGGAGTTCTGTCTGCCAACAAAAAAGTATGCTGATGTGATAATTCCAAGAGGAGCTGATAATCTGGtTGCCATAAATTTGATAGTGCAACACATTCAGGATATTCTAAATGGTGGTTTGACCAAACGCTTGAACGGATACCTCAATGGCCACAATACGCCTCGTAAGCGGCATCCCTCAGAGTCCAGCAGCAGGCCGCATTGACCAGCCTTCCATCAGGACGTCTGGGAGTGTGGAAGAGAATGAATGTGTGAAGGATGGATGCAAGAGAAAAGAAGGATTGCTTGTGCATTCTGTTAATTAGCCAACACTGTATAAGACAAAAATTCAAGAATTTCAAAGACTGCCTTTTATTTCGTTCTGcttccttctttttgttttttggactgGCTACACTTGATACTACTACACTTGTTTTAGAAGTTAGAAAGATAAATGGAACTTTTAGTTCTGGGATTGTTAAAGGTCAAAATggatatttccttttatttattttagcatttttattattttttttttttttactttttctttaaaagtatgTTTGTTGACAAAAAGTGGGGATGCagataattaaatgttacaCGACTCCATGGTAATGAGGATTGaagatatattttagaatttattattattattatttttacccttttatcatatcatttatttaaaggacCTCTTCACTGGATagagtccaaaaaaaaagttgttttaaaatccTTTGTTTGCTTTTCAGTAGCTTTTAGTATTCTGGCATTAGTTTTGTGATGCCCCTCTATGATCAGTGTTTCTTGCAGAAGGATATACATTTATTCCTCCTTTTCACTTGAACAATTCAGGCAGTGTTTTTACAACAGGCCTCTCAGGGTGTAGCtactacaaattaaaaataacttacttTTTGTCCTAAAAGGAATGAGACGTCTATACAGAAGACATCAGAGATCACATCTCTAAAATAGAAAGGGCGGTAATCTGGCTAATTAAGCAAAgctaaatttgtatatattcatattccgTTCTGAATTACAAACCTTGTACTTCTAGAATATTTACAGAGATGCCATGTGATCCTCATTAACCATGGTCTTGTGCTTTAAAACAAAGCCCAGTGGTTGATTGTGCAGCATTGCTGTGGAGTGTTAGCATGAACTAATGTCTGTTTGTCAAGAGATTTATGTTCATATACTATGCACTGTAACCTTGACTCTAATAATGCAATTTGACACTCAGTTTAATTAGACTTGTGCAAGGCATTTAGACAAACGGAGATGCTTACTTGAAATGAATTCTCAGAGTCTCTTTATCCTttgcaatgttattttattttatttttttaaacccattATTTTACTAGTTGTGACTTAAAATATACACCATGATGCCACTTTGGTAAGTCTTTGACAAAACTCACCAAAGAGTTAATTTAGTTTCCTTCAACAGATGTTTTTGTAGTCCGAACCATGTAATTTCCATGCGCAATACATATTTTCCCTTTTAGCTCAGTTTTCCTGCATCTTAGAGCCAGAGAGAAGCCATTAAAGGCACTCTGAAATCATTCAGGGATGTGAAACTAAAAAATCCAACCTTTAAACTTGATCCTGACTGTAAAATGACCCCATATATATCTTCCCTTTGGGTTTTGAAATCTTTAACTTAAAATTGGTTAATCAGTTATATACAAATTGTTCCCATTTACCTTTCTTTGTAATAtcgctgtattttattttctggttGGCTTCATTCAAATTGCTGCTATGATACAGGTGACTCATTTACTATCttatgtaaaaatgataaatggtCAGTTATTAAATGATGTGATTATTAATTTGATCGAATACAATTGTTTCGAGGATAATGCCATTTAGATTTCATTATCTAAATGCCATTAAATAAGTCATCATTGTTTCACTAAGGCCAGAGGAAAAAaccgacaacaaaaaaaaaacatgacttgaatatttatttggtGCATTCTTACCCCTGTGCTGTTTATTTGGacaaaattgcataaattattCTCAATATTTTGTTGACTTCTGGTCCTTGGTTTCCTTTGGGTATTAAATGTGTGATTCAATCAG

Function

symbol description
uck2a Predicted to enable ATP binding activity and uridine kinase activity. Predicted to be involved in CTP salvage and UMP salvage. Predicted to act upstream of or within phosphorylation. Predicted to be active in cytosol. Orthologous to human UCK2 (uridine-cytidine kinase 2).

NR:

description
PREDICTED: uridine-cytidine kinase 2-A isoform X1

GO:

id name namespace
GO:0044206 UMP salvage biological_process
GO:0044211 CTP salvage biological_process
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0004849 uridine kinase activity molecular_function

KEGG:

id description
K00876 udk, UCK; uridine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246942.1 True 2752 mRNA 0.37 7 10302292 10313338

Neighbor

gene id symbol gene type direction distance location
LOC122350469 NA coding upstream 22691 10272832 ~ 10279601 (+)
fzr1a fzr1,fzr1a,LOC105904033,LOC105895242 coding upstream 37521 10259748 ~ 10264771 (+)
nfic nfic,LOC107585880,LOC107745803,LOC107548967,LOC107695213 coding upstream 70493 10152268 ~ 10231799 (+)
mfsd12b mfsd12,mfsd12b,LOC107585878,LOC107695260,LOC107745804 coding upstream 170047 10126276 ~ 10132245 (+)
csnk1g2b LOC107745806,LOC107695259,LOC106925954,LOC106953035,LOC103468226,LOC107676849,LOC107585879 coding upstream 177692 10099845 ~ 10124600 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding downstream 1300 10314638 ~ 10316153 (+)
porcn porcn,LOC107668076,LOC107731151,LOC107585894,LOC107745789,LOC108441640 coding downstream 7354 10320692 ~ 10326851 (+)
spryd4 spryd4,LOC107731260,LOC107585895,LOC107585896,LOC107549155,LOC107745790,LOC107668079,LOC107695231 coding downstream 13962 10327300 ~ 10329779 (+)
cry3a cry1ba,LOC107668038,LOC108441644,LOC108265656 coding downstream 56989 10370327 ~ 10386088 (+)
LOC122349960 itpr3,LOC107731245,LOC107745784 coding downstream 181550 10494888 ~ 10519569 (+)
G62691 NA non-coding upstream 10072 10233598 ~ 10292220 (+)
G62697 NA non-coding upstream 61165 10235180 ~ 10241127 (+)
G62704 NA non-coding upstream 147690 10154344 ~ 10154602 (+)
G62703 NA non-coding upstream 151655 10149900 ~ 10150637 (+)
G62690 NA non-coding upstream 153112 10148916 ~ 10149180 (+)
G62732 LOC107731259 non-coding downstream 24767 10338105 ~ 10338669 (+)
G62733 NA non-coding downstream 28615 10341953 ~ 10342203 (+)
G62739 NA non-coding downstream 108515 10421853 ~ 10422562 (+)
G62693 NA non-coding downstream 132340 10445678 ~ 10484599 (+)
G62743 NA non-coding downstream 213641 10526979 ~ 10530687 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other upstream 596653 9704481 ~ 9705639 (+)
smim15 smim15,LOC107700545 other upstream 1823961 8477171 ~ 8478331 (+)
soat1 soat1,LOC107549691,LOC107700347,LOC107657858,LOC107758003 other upstream 2773206 7306119 ~ 7529086 (+)
G61713 LOC107550213,LOC107755291,LOC107599058,LOC107700515,LOC107757991,LOC107665059 other upstream 3452581 6848481 ~ 6849711 (+)
G61678 LOC107665067,LOC107598994,LOC107757984 other upstream 3535749 6756105 ~ 6766543 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other downstream 35576 10348914 ~ 10367863 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other downstream 118464 10431802 ~ 10478799 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other downstream 222805 10536143 ~ 10551791 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 879386 11192724 ~ 11197803 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other downstream 981467 11294805 ~ 11311433 (+)

Expression


Co-expression Network