G62897


Basic Information

Item Value
gene id G62897
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10973247 ~ 10973966 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93122
ATCTGGTCATAAATGTGTTTCAGTTcaagtatttttgttcatttcacgCACATTTTGATCTTTTACATTCATTAATAGGTACATTTTATATCAGGTGTCAAAGACAATAATGATGCTGTCTAGATTTATTTCTAAATCAGTACAGCAATAATGCATCATTTGAAACCTGATATAAAGTAGATTTGTGTGagttttttttgattattttagcaAAGCTACTAGAGGTAGCATGTAGCTATGCCTGTTGTAGTCGGTGACTGGAGGCCTTGCCTGGAAGAATTCTGGTGCGTCTGTTGATCCTGGAAGCTGGAGCAGGGATGCGACTGCCTCTGCCCAGACCTCGAGGCTTGGACTCGGATGTGATTGTTGTCGTCTCACCTTGTGCGTGTGGGGGTCTGCTCTGTTGTGCCGCTCTCCTCCGTGAGTTCTGTTTACAACCCTCGATTCCCATGAGGTGAGACTTC
>TU93123
ATCTGGTCATAAATGTGTTTCAGTTcaagtatttttgttcatttcacgCACATTTTGATCTTTTACATTCATTAATAGGTACATTTTATATCAGGTGTCAAAGACAATAATGATGCTGTCTAGATTTATTTCTAAATCAGTACAGCAATAATGCATCATTTGAAACCTGATATAAAGTAGATTTGTGTGagttttttttgattattttagcaAAGCTACTAGAGGTAGCATGTAGCTATGCCTGTTGTAGTCGGTGACTGGAGGCCTTGCCTGGAAGAATTCTGGTGCGTCTGTTGATCCTGGAAGCTGGAGCAGGGATGCGACTGCCTCTGCCCAGACCTCGAGGCTTGGACTCGGATGTGATTGTTGTCGTCCTACCTTGTGCGTGTGGGGGTCTGCTCTGTTGTGCCGCTCTCCTCCGTGAGTTCTGTTTACAACCCTCGATTCCCATGAGGTGAGACTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93122 True 464 lncRNA 0.43 2 10973247 10973966
TU93123 False 464 lncRNA 0.43 2 10973247 10973966

Neighbor

gene id symbol gene type direction distance location
b3gnt7l LOC107555588,LOC107731177,LOC107668025,LOC107549282,LOC107695240,LOC107745837 coding upstream 2478 10968059 ~ 10970769 (+)
dffb dffb,LOC107745838 coding upstream 8524 10962188 ~ 10964723 (+)
LOC122351050 ajap1,LOC107731270,LOC107745781,LOC107668121,LOC107555602,LOC107695280,LOC107549259 coding upstream 267705 10659401 ~ 10705542 (+)
LOC122351073 LOC107555585,LOC107731134,LOC107695233,LOC107667986,LOC107745826,LOC101883956 coding upstream 415987 10552901 ~ 10557260 (+)
LOC122349965 ela2,LOC107668061,LOC107555594,LOC107731230,LOC102217447,LOC107745828 coding upstream 437687 10533737 ~ 10535560 (+)
LOC122350694 lrrc47,LOC107731176,LOC107667988 coding downstream 17538 10991504 ~ 11027837 (+)
LOC122351105 lrrc47,LOC107731176,LOC107745777,LOC107667988 coding downstream 186769 11160735 ~ 11166133 (+)
mad2l2 mad2l2,si:dkey-23c22.2,LOC107549323,LOC107731212,LOC107668049,LOC107695292 coding downstream 195636 11169602 ~ 11172533 (+)
LOC122351035 LOC107668047 coding downstream 199340 11173306 ~ 11183775 (+)
LOC122350429 LOC107668046 coding downstream 210558 11184524 ~ 11187447 (+)
G62873 NA non-coding upstream 153830 10819217 ~ 10819417 (+)
G62868 NA non-coding upstream 173272 10799693 ~ 10799975 (+)
G62743 NA non-coding upstream 442560 10526979 ~ 10530687 (+)
G62693 NA non-coding upstream 488648 10445678 ~ 10484599 (+)
G62739 NA non-coding upstream 550685 10421853 ~ 10422562 (+)
G62904 LOC107549999,LOC107731193 non-coding downstream 182052 11156018 ~ 11248294 (+)
G62909 NA non-coding downstream 183042 11157008 ~ 11272858 (+)
LOC122350460 NA non-coding downstream 229863 11203829 ~ 11204547 (+)
G62996 NA non-coding downstream 377345 11351311 ~ 11394149 (+)
G63024 emilin3a,LOC107731182,LOC107668027,LOC107745820,LOC107550125,LOC107549958,LOC107695222 non-coding downstream 473067 11447033 ~ 11447271 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other upstream 421456 10536143 ~ 10551791 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other upstream 494448 10431802 ~ 10478799 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other upstream 605384 10348914 ~ 10367863 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other upstream 1267608 9704481 ~ 9705639 (+)
smim15 smim15,LOC107700545 other upstream 2494916 8477171 ~ 8478331 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 218758 11192724 ~ 11197803 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other downstream 320839 11294805 ~ 11311433 (+)
plp2a NA other downstream 468003 11441969 ~ 11445008 (+)
slc17a9a slc17a9a,LOC107731251,LOC107668105,LOC107549987,LOC107745761,LOC107549524 other downstream 560534 11534500 ~ 11541121 (+)
ppdpfa ppdpfa,LOC107678627,LOC107549986,LOC107745755,LOC107668053,LOC107731217,LOC108412507,LOC103034602 other downstream 588315 11562281 ~ 11564408 (+)

Expression


Co-expression Network