LOC122351073 (LOC107555585,LOC107731134,LOC107695233,LOC107667986,LOC107745826,LOC101883956)


Basic Information

Item Value
gene id LOC122351073
gene name LOC107555585,LOC107731134,LOC107695233,LOC107667986,LOC107745826,LOC101883956
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10552901 ~ 10557260 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247927.1
attttaaatattaccattatattcataccatttatacaaatatgaaaaaaaaccagttaaaaaaataataataataacttcaGCTCCGTCTGCCTGCTTTAGACCTTGTTAATTGGACAATGTGCCGGATTCTGAACATCCTGCTGGCTCTTCTGAGTCGCTTTCTTTTTGCGGTGCATGGCATCCTGACGGTGTGGCGTGTGGTGGAGGTGACAGGCGAGCCCTCCTATTGGCTGCTGCTGACGGGTGTGGCACTGCTGGGGGTAGAGATGGCCATCACCATCAAATACACACGCAATGCTGAATGGAAATGGTTCTCACCTATGGTGTTTCTATATCTGAGCACTGTGATTCCCTCGGTCTGGTTCCTGGAACTGAACCTCCTACAGTCCAATTTGCCCATCAACTCCAGCACAAACTCTGACCCGCAATTCTTCTCCCAGATCGCGCTAACAACGggGTTGGCAGAACTTGATCCTGAGAACTGGGTGGAGGCTCTTGAGCAGACCATGCTGATCGTTTTGGTTCTGGGCCGCTGGCTGATGCCGAAGGGTGACATGTCACGTGACCAGCTATCCCAGCTCCTTATGGTTTACGTGGGGCTTGGAGCGGATATCCTGGACATATTTGACACGTTTAAGGAGCCACAAGTGAAGACCAAGCAGGCCGTGATTATTGTTGGGCTAAGTTTGTTCTCCTGGGCCTTGATGCAGTTTCCTCTTGTTCTTACCCAGACCAGCCGGCCCAAGGTCCAGGTGGAGGATCAGTCAGAGACCGCCCAGCTGGGGCGAGCTGGCTTGACAGTTTCCTGCTGCTCCAGTGAAGTCTGGAGTCTTCTGCTAACGGTGGGTCTGCAGGATGGACCATTCCTGATTTACCGCCTGTACCTCATGATACGTGAGAATGTTCTGAACCAGCTGATGATCTTCTTCACGTGCAAAAATATCCTAATTGTTTTGCTGGAGGTCTACAGGATCTGTGTTATCCACTTTGAGCAGAGCAATCTGAGAAGTGGAACTGAGTCATGTGACCCATCTCATGAACATTCAGAATGGACTGATGGAGAAGCTATAGAATCCAGCTGTCAGGAATAGATTATATTCACACTTAATGAAAATACTGTCTGTATTTTGAAa

Function

NR:

description
PREDICTED: transmembrane protein 26-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247927.1 True 1136 mRNA 0.48 3 10552901 10557260

Neighbor

gene id symbol gene type direction distance location
LOC122349965 ela2,LOC107668061,LOC107555594,LOC107731230,LOC102217447,LOC107745828 coding upstream 17341 10533737 ~ 10535560 (+)
alas2 alas2,LOC107555603,LOC107745783,LOC107549233,LOC108441648,LOC108265738,LOC107667982 coding upstream 26831 10519695 ~ 10526070 (+)
LOC122349960 itpr3,LOC107731245,LOC107745784 coding upstream 33332 10494888 ~ 10519569 (+)
cry3a cry1ba,LOC107668038,LOC108441644,LOC108265656 coding upstream 166813 10370327 ~ 10386088 (+)
spryd4 spryd4,LOC107731260,LOC107585895,LOC107585896,LOC107549155,LOC107745790,LOC107668079,LOC107695231 coding upstream 223122 10327300 ~ 10329779 (+)
LOC122351050 ajap1,LOC107731270,LOC107745781,LOC107668121,LOC107555602,LOC107695280,LOC107549259 coding downstream 102141 10659401 ~ 10705542 (+)
dffb dffb,LOC107745838 coding downstream 404928 10962188 ~ 10964723 (+)
b3gnt7l LOC107555588,LOC107731177,LOC107668025,LOC107549282,LOC107695240,LOC107745837 coding downstream 410799 10968059 ~ 10970769 (+)
LOC122350694 lrrc47,LOC107731176,LOC107667988 coding downstream 434244 10991504 ~ 11027837 (+)
LOC122351105 lrrc47,LOC107731176,LOC107745777,LOC107667988 coding downstream 603475 11160735 ~ 11166133 (+)
G62743 NA non-coding upstream 22214 10526979 ~ 10530687 (+)
G62693 NA non-coding upstream 68302 10445678 ~ 10484599 (+)
G62739 NA non-coding upstream 130339 10421853 ~ 10422562 (+)
G62733 NA non-coding upstream 210698 10341953 ~ 10342203 (+)
G62732 LOC107731259 non-coding upstream 214232 10338105 ~ 10338669 (+)
G62868 NA non-coding downstream 242433 10799693 ~ 10799975 (+)
G62873 NA non-coding downstream 261957 10819217 ~ 10819417 (+)
G62896 NA non-coding downstream 414452 10971712 ~ 11143096 (+)
G62897 NA non-coding downstream 415987 10973247 ~ 10973966 (+)
G62904 LOC107549999,LOC107731193 non-coding downstream 598758 11156018 ~ 11248294 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other upstream 1110 10536143 ~ 10551791 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other upstream 74102 10431802 ~ 10478799 (+)
col2a1a col2a1a,LOC107585898,LOC107668081,LOC107695274,LOC107549173,LOC107731244 other upstream 185038 10348914 ~ 10367863 (+)
G62483 fam78bb,LOC107717547,LOC107676968,LOC107585866,LOC107751100,LOC107550401,LOC107695225 other upstream 847262 9704481 ~ 9705639 (+)
smim15 smim15,LOC107700545 other upstream 2074570 8477171 ~ 8478331 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other downstream 635464 11192724 ~ 11197803 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other downstream 737545 11294805 ~ 11311433 (+)
plp2a NA other downstream 884709 11441969 ~ 11445008 (+)
slc17a9a slc17a9a,LOC107731251,LOC107668105,LOC107549987,LOC107745761,LOC107549524 other downstream 977240 11534500 ~ 11541121 (+)
ppdpfa ppdpfa,LOC107678627,LOC107549986,LOC107745755,LOC107668053,LOC107731217,LOC108412507,LOC103034602 other downstream 1005021 11562281 ~ 11564408 (+)

Expression


Co-expression Network