G63052


Basic Information

Item Value
gene id G63052
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11518410 ~ 11522911 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93355
gtttccttttttttttttttttttttttttttttttttttTTTGCATGAAATAAGGGTTTATTGACAGGTAAACAAAAGAAGGGTCTTGGCAAAGCATGCTTTACGTGTATTGAAAGATTGAACACAGTTTtgatatacaaaaatgttttcctgaCTTGTCTTTTTCGgagagtatttatttttctaaacaaatCCATAAATTTCCGTTGAACATTTATTCAAGTATACACggaatacacattaaaaaaaaaaaaaatcaaagacagttaacatttgtttttaaacaattaccAGTACGAGACCAGACAGTGCTCACAGAACATGATAATGCAGATGTTTGATCAGCCATTTCTTTCAGGATATACTAGTGACctgtctttttgcatttttttttagttttgcaaTGTGAGCCAGATTCCTTTTgtacacaaaaaacattcaagtatatctgacattttaaatatcggCTCGAGTTCCTTATACTGTCTATATTATCAAATCTCTATCATATTCTTTCTTGTTTTCACTGCATAGCATGATTACATTATAGTGGTTAAACGTATGTTAAATAATCcaatctattttattattattattattattattactag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93355 True 612 lncRNA 0.28 2 11518410 11522911

Neighbor

gene id symbol gene type direction distance location
nkain5 LOC107668065,LOC107745763,LOC107731206,LOC107549956,LOC107695305 coding upstream 6220 11506832 ~ 11512190 (+)
uckl1a uckl1a,LOC107549990,LOC107668066,LOC108437574,LOC103355333 coding upstream 34731 11468421 ~ 11483679 (+)
samd10a samd10a,LOC107731152,LOC107668017,LOC107745835,LOC107695303,LOC108437575 coding upstream 50454 11453581 ~ 11467956 (+)
sypa sypa,LOC107731262,LOC107549993,LOC107668097,LOC107549468,LOC107745764,LOC107695302,LOC108437576 coding upstream 76587 11433321 ~ 11441823 (+)
cacna1fb cacna1fb,LOC107668072,LOC108437577,LOC105898895,LOC103460216 coding upstream 88642 11397378 ~ 11429768 (+)
si:ch211-196c10.13 LOC107549955 coding downstream 5977 11528888 ~ 11529572 (+)
gid8a gid8a,LOC107549514,LOC107549954,LOC107560896,LOC108266002,LOC100691864,LOC108412511 coding downstream 7894 11530805 ~ 11534404 (+)
dnajc5aa dnajc5,dnajc5aa,LOC107668106,LOC107745759,LOC107678568,LOC107549988,LOC107549528,LOC108412505,LOC103036084,LOC105906402 coding downstream 18484 11541395 ~ 11548885 (+)
tpd52l2a tpd52l2a,LOC107731215,LOC107668052,LOC107549984,LOC107745757,LOC107678582 coding downstream 26313 11549224 ~ 11557340 (+)
dnmt3ba LOC107549981,LOC107667992,LOC107549566,LOC107678654 coding downstream 116270 11639181 ~ 11651383 (+)
G63024 emilin3a,LOC107731182,LOC107668027,LOC107745820,LOC107550125,LOC107549958,LOC107695222 non-coding upstream 71139 11447033 ~ 11447271 (+)
G62996 NA non-coding upstream 124261 11351311 ~ 11394149 (+)
G62909 NA non-coding upstream 245552 11157008 ~ 11272858 (+)
G62904 LOC107549999,LOC107731193 non-coding upstream 270116 11156018 ~ 11248294 (+)
LOC122350460 NA non-coding upstream 313863 11203829 ~ 11204547 (+)
LOC122350248 NA non-coding downstream 92556 11615467 ~ 11620167 (+)
G63094 NA non-coding downstream 96108 11619019 ~ 11619230 (+)
LOC122350251 NA non-coding downstream 226649 11749560 ~ 11752585 (+)
G63158 NA non-coding downstream 247870 11770781 ~ 11797971 (+)
G63173 NA non-coding downstream 332475 11855386 ~ 11855620 (+)
plp2a NA other upstream 73402 11441969 ~ 11445008 (+)
G62940 LOC107668028,LOC107745767,LOC107695299,LOC107549994 other upstream 206977 11294805 ~ 11311433 (+)
LOC122350428 LOC107668044,LOC107731208,LOC107555595 other upstream 320607 11192724 ~ 11197803 (+)
fhad1 LOC107731229,LOC107695278,LOC107550056,LOC107667985,LOC107555592,LOC107745840,LOC107745827 other upstream 966619 10536143 ~ 10551791 (+)
G62692 cry1ba,LOC107578471,LOC108441644,LOC107668038,LOC101164536,LOC108265656,LOC103358259 other upstream 1039611 10431802 ~ 10478799 (+)
slc17a9a slc17a9a,LOC107731251,LOC107668105,LOC107549987,LOC107745761,LOC107549524 other downstream 11589 11534500 ~ 11541121 (+)
ppdpfa ppdpfa,LOC107678627,LOC107549986,LOC107745755,LOC107668053,LOC107731217,LOC108412507,LOC103034602 other downstream 39370 11562281 ~ 11564408 (+)
fance LOC107731142,LOC107668098,LOC107549969,LOC107678824,LOC107745739,LOC107591838,LOC107577385 other downstream 294146 11817057 ~ 11820659 (+)
si:ch211-163l21.10 LOC107731153,LOC107549947,LOC107668018,LOC107745734 other downstream 330683 11853594 ~ 11857421 (+)
LOC122350223 NA other downstream 524598 12047509 ~ 12050968 (+)

Expression


Co-expression Network