CI01000005_06481721_06483251


Basic Information

Item Value
gene id CI01000005_06481721_06483251
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6481355 ~ 6483265 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06481721_06483251.mRNA
ATGGCAGTGGACTGGTGGGGCTTTGCCTATGCTGCAGCTCTTGCTCTGGGAGGATTTATGGGATATAAAAGAAAAGGAAGTGTGGTGTCATTGATTGCTGGACTCTTCTTTGGAAGTGTGTCTGCTTATGGAGCGTTTCGAATATCAAATGATCCACAGGATTACTGGACCTCTCTGATGTCTGCTGGCGTACTGGCAGTTGTGATGGGAATGAGATTCAGGAAATCTGGAAAGTTAATGCCCGCGGGCATCATGGCAGGACTGAGGTAAAAGTGTTTGTAAAGTTTGTGAGGTTGTTTCCATTGTTAATGCCTTCACAGTAAAATATCATATAAATTCTTGTGTCCAGAAGTATCAAAATATAGCTGATATAGCTACAGTTACATGGCAGTGTTTTCTCAGCCATGATGATATTTTATATTTATAAACTGTACTTGCTCTGGAACAAAGCAGCCAAGCAGATTTGTGTTTAATGCAAGATGTAAAATGCAGTAAAAATCTAGCTTGTTGTATATAAGTATCAAAATCAAGTCATGTTTTCCCCACACTGCTTTTTACTACATGAACGCAAGGAAGAGAGATATTGAATATTTTCTTTTATTTATATGCTCCAATAGATTGATTAATAGTAATAAA

Function

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06481721_06483251.mRNA False 636 mRNA 0.38 3 6481355 6483251

Neighbor

gene id symbol gene type direction distance location
CI01000005_06458571_06470774 NA coding downstream 10428 6458485 ~ 6470927 (-)
CI01000005_06435458_06437854 NA coding downstream 43178 6435458 ~ 6438177 (-)
CI01000005_06409550_06410268 NA coding downstream 70685 6409288 ~ 6410670 (-)
CI01000005_06354477_06367249 POLH coding downstream 113979 6354375 ~ 6367376 (-)
CI01000005_06351074_06352066 NA coding downstream 129289 6351068 ~ 6352066 (-)
CI01000005_06507647_06517258 NA coding upstream 23906 6507157 ~ 6517566 (-)
CI01000005_06518032_06559301 NRXN1B, NRXN1 coding upstream 34781 6518032 ~ 6559436 (-)
CI01000005_06567196_06595338 NRXN1 coding upstream 83658 6566909 ~ 6597439 (-)
CI01000005_06609686_06619218 COX15 coding upstream 126391 6609642 ~ 6619218 (-)
CI01000005_06623484_06646729 ABCC2 coding upstream 140093 6623344 ~ 6646729 (-)
G40188 NA non-coding downstream 4478 6398299 ~ 6476877 (-)
G40225 NA non-coding downstream 30814 6447184 ~ 6450541 (-)
G40196 NA non-coding downstream 78471 6392993 ~ 6402884 (-)
G40240 NA non-coding downstream 185775 6295280 ~ 6295580 (-)
G40229 NA non-coding downstream 191517 6289410 ~ 6289838 (-)
G40228 NA non-coding upstream 25360 6508611 ~ 6554943 (-)
G40310 NA non-coding upstream 164901 6648152 ~ 6648368 (-)
G40313 NA non-coding upstream 168437 6651688 ~ 6651918 (-)
G40316 NA non-coding upstream 196785 6680036 ~ 6681249 (-)
G39515 NA other downstream 646816 5833792 ~ 5834539 (-)
G38415 NA other downstream 2080245 4381238 ~ 4401110 (-)
G38510 NA other downstream 2275147 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 4592079 1883222 ~ 1899867 (-)
G36628 NA other downstream 4817076 1663267 ~ 1664279 (-)
G40487 NA other upstream 712544 7195795 ~ 7196428 (-)
G40540 NA other upstream 1042970 7526221 ~ 7532148 (-)

Expression


Co-expression Network