CI01000005_06507647_06517258


Basic Information

Item Value
gene id CI01000005_06507647_06517258
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6507157 ~ 6517566 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06507647_06517258.mRNA
ACAAGCTTCACATGTTAGCAAAGAAACTAATTATGTGGAGGAGCAGGAACCTCCTGTCATTGCATGTTATGCATGATCCAGGAATAATGAACAGGGGAGCGGATCTACTGTCCAGAGGGGATCCTCTGTATGGGGAATGGAGACTCCACCCCCAGTGATCCCAGTGTTTTTTCTCTCTGACAGGTGACGATGCACCATTAGGTGTGGATGCTCTAGCCCACCAGTGGCCAGACTTGTTACTTTGTGCGATACCTCAGTTGAGCCTAATCAAGCAGACATTATGGAGGGTTTGAGAATGTAGACGTATAATGATTCTGATCACACCATACTGGCCGGGGAGACTGGGGGTTGCAAAGATTGTGCAACTGCTCTACGACCAGCCATGGCCGTTACCAGCACACAAGGATCTCCTTTCACAAGCAAGGAGAAATATTCCACCCCTCCCCTCAGAAACTGGCTCTCTGGGCCTGGCCTGTGAGAGGTTGAATCTGAATGTGGCTGGATTACCTCCGAAAGTGATTGAGAATGGGTTAAAGAATGGAAACATTGATAGCGAACGGCTGGTGATCGCTAGACAGCGAATTCCATATCGACTCGGTCGAGTAGTTGACGAATGGCTACTCGACAAAGGCCGCCAGCTCACAATCTTCAACAGCCAGATGACCATCCAGATCGGCGGTTGGGAAAGAGACCACAGCCGTGCCTTCCAGGGCCAAATGTCTGGTTTCTATTACAATGGCTTGAAAGTTTTTAACATGGCTGTGGAAGGAGATCCCAACATCCGCATCGAAGGCAGCGTGAGGCTGGTTGGGGAGGCGCAATCTTCCTCCATAACGCCACAGTCCAGTGCTACGGTCCATCGCTCTGAGACCTCTACCTCAGTTATGGAGATCATCACCACAACCACCTCCAAGCACCAGATGAAACACACCACACCAGGAGAACCCCAGCAGACTACTGATGACTTGTTGGTGGCATCTGCCGAGTGCCCGAGCGACGATGAGGACATTGACCCGTGCGAGCCGAGCTCAGCTAACCCTACAGGCCCCGTGGTGAAGAGCTATCCTGGTCAGTCAGATGTTTTCCGTGAGTCCAGCAGTACCACAGGCATGGTGGTTGGCATCGTGGTCGCTGCCGCACTTTGTATCCTCATTCTTCTCTATGCCATGTACAAATACCGCAACCGTGACGAGGGATCGTACCACGTGGATGAGAGCCGCAACTACATTTGCAATTCAGCCCAGTCAAATGGATCAGTGGTAAAGGAGAAACCCATGGACGGTACCAGTTGTGTCATTCTAGCACACGTCAAACATAAGACCTCATGCAACATAAAAACTGAGAAACTGTGGAAAAACAGTCATCATATCTTAAACAGTGATGCAGCGAAGAAAATGTTTTCTTCAATATTTAATTTCAGCATATTGGAATGGATGAAAGAACAGGAAGATTCTCACTTGAAGATGTTCGGAAAATGTCCAAAAATGATCCATAAGTGATGGAAAGATGACCAAATCCATCTAGACTCTGGCATTTTCCAAATGAGCTCAGTTTCTTGTGTAAGAAGAAGGGGAATGAAGAGCAACTGATGAATTATGACAAATTATGACTTTTTTTTTTCTTTTCTTTTTTTTGCCGTTTGTGTTGCTGGGAACTTTGCAATGATGAAAAAGCTGAAACAACTCCTCAAAGCATCACTGAAGAATGAAAGATCAAGAAAGGAAAGAAGTCTCTCAGTGTTTTTACTTTACAACTCCTATAGAGCTAATATGAATTTGACAGCGGATGGTGAAAGGGAAAAGATTATGCCATCGCACATTATCTTTGGCAAACATGGACATCTCAGTGAACATGGATGCAACATTTTATTTAATATGTTTCTATATGTTTCAAAGGTGTGCTTTTTGGACTGACAAATTTGTGTTTTATAATCTTTTGCATAGAGGATGCAAACTATATCTGCTCCTTGGCAGAAAAGACTACAAAAAA

Function

NR:

description
Neurexin-1a-alpha, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06507647_06517258.mRNA True 1989 mRNA 0.46 6 6507157 6517566

Neighbor

gene id symbol gene type direction distance location
CI01000005_06481721_06483251 NA coding downstream 23906 6481355 ~ 6483265 (-)
CI01000005_06458571_06470774 NA coding downstream 36230 6458485 ~ 6470927 (-)
CI01000005_06435458_06437854 NA coding downstream 68980 6435458 ~ 6438177 (-)
CI01000005_06409550_06410268 NA coding downstream 96487 6409288 ~ 6410670 (-)
CI01000005_06354477_06367249 POLH coding downstream 139781 6354375 ~ 6367376 (-)
CI01000005_06518032_06559301 NRXN1B, NRXN1 coding upstream 466 6518032 ~ 6559436 (-)
CI01000005_06567196_06595338 NRXN1 coding upstream 49343 6566909 ~ 6597439 (-)
CI01000005_06609686_06619218 COX15 coding upstream 92076 6609642 ~ 6619218 (-)
CI01000005_06623484_06646729 ABCC2 coding upstream 105778 6623344 ~ 6646729 (-)
CI01000005_06655061_06664135 NA coding upstream 137315 6654881 ~ 6664340 (-)
G40188 NA non-coding downstream 30280 6398299 ~ 6476877 (-)
G40225 NA non-coding downstream 56616 6447184 ~ 6450541 (-)
G40196 NA non-coding downstream 104273 6392993 ~ 6402884 (-)
G40240 NA non-coding downstream 211577 6295280 ~ 6295580 (-)
G40229 NA non-coding downstream 217319 6289410 ~ 6289838 (-)
G40310 NA non-coding upstream 130586 6648152 ~ 6648368 (-)
G40313 NA non-coding upstream 134122 6651688 ~ 6651918 (-)
G40316 NA non-coding upstream 162470 6680036 ~ 6681249 (-)
G40349 NA non-coding upstream 236250 6753816 ~ 6754017 (-)
G39515 NA other downstream 672618 5833792 ~ 5834539 (-)
G38415 NA other downstream 2106047 4381238 ~ 4401110 (-)
G38510 NA other downstream 2300949 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 4617881 1883222 ~ 1899867 (-)
G40487 NA other upstream 678229 7195795 ~ 7196428 (-)
G40540 NA other upstream 1008655 7526221 ~ 7532148 (-)

Expression


Co-expression Network