CI01000005_06655061_06664135


Basic Information

Item Value
gene id CI01000005_06655061_06664135
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6654881 ~ 6664340 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06655061_06664135.mRNA
ATTTACAATTTTGTTTCCATATTTATTGTTTCTTCCTTCAAACATTACTTCTGTAACTTTTTCTGTTGCAGTTCCTGTATAAATCCGTATATGCCAACTCTTCTCAGTTTGTGTAAATGCCCCTTTTTTGTGGTACATATGCCACTTCAGATGCAGCTTCTGTGCCACTTTTGCAGTGTAAACAGCCGACGCTTGTTTCTTTCAGATGTCAGACGGTCTCCTGATGGAGGTATGTGTGGACTCAGTTGAGTCAGCCATAAACGCAGAAAGGGGAGGTCTGTTGCAGGTGGTCAAAGAGAACGTGCGGATCCCGGTGTATGTCATGATTCGACCCCGTGGAGGAGACTTCCTGTACTCGGACTGGGAGGTGGAGGTGATGAAGAGGGATATTGAGCAGATGAAGAGTCACAGAGCGGACGGGCTGGTGTTCGGAGCGCTGACAGAAGACGGACGTGTGGATACTGAGCTCTGCATGGAACTTCTGGCGGTTTCTCGACCTTTACCAGTTACGTTTCACAGAGCCTTTGATATGGTCCACGATCCAGTGGTTGCGTTAGAAGCTCTGGTCTCGCTGGGCTTTGAGAGGATTCTGACCAGTGGTTGTGACAGCTCTGCTCTGGAAGGTTTACCTGTAATTAAACGACTGGTGGAACAGCTTAACAACATGTGCGAATGCCAACATGTTTTGGAATCCGCTGTAGGCAATGGGAGATTTATTCAGGTCTCATGTTGGGCAAGTCTATTTTTGTGGCATGCAAAAGGCAGAATAGCAATAATGCCAGGCGGTGGAATCACCGAAAGAAACCTTCAGAGGATTCTAGAAGGCTCCGGCTCTCAGGAGTTCCACTGCTCTGCTCGCTCCAGCAAGGACTCCAGCATGAAGTTTAGGAATTGTAATGTCAGTATGGGAGGCTCTCTGTCTGTCCCAGAATATGCAGTAAAAGTGGCTGATGTGACTAAAGTACGAACACTGAACGCCATTGCGAGGAACACACTCTAGGATACATGGAGAATCCTGTACAGTGATACCAGAGGGAAACTCCTGTAATTCTTCAATAAGGATATTCCTGTGATGACAGCTTTTGTTGGAACAAAATGAAAAACTTTAAAATGTCAAGATCAGCAGCACTGTGTTTTGTTTAGCTTTTGACATTGTGATGATTTGCAGGCGTGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06655061_06664135.mRNA True 1180 mRNA 0.46 8 6654881 6664340

Neighbor

gene id symbol gene type direction distance location
CI01000005_06623484_06646729 ABCC2 coding downstream 8152 6623344 ~ 6646729 (-)
CI01000005_06609686_06619218 COX15 coding downstream 35663 6609642 ~ 6619218 (-)
CI01000005_06567196_06595338 NRXN1 coding downstream 57442 6566909 ~ 6597439 (-)
CI01000005_06518032_06559301 NRXN1B, NRXN1 coding downstream 95445 6518032 ~ 6559436 (-)
CI01000005_06507647_06517258 NA coding downstream 137315 6507157 ~ 6517566 (-)
CI01000005_06721142_06724797 NA coding upstream 56568 6720908 ~ 6724833 (-)
CI01000005_06765592_06772165 NA coding upstream 100933 6765273 ~ 6772165 (-)
CI01000005_06772433_06793278 NVL coding upstream 108093 6772433 ~ 6793278 (-)
CI01000005_06815976_06894322 SLIT1A, SLIT1 coding upstream 151038 6815378 ~ 6894585 (-)
CI01000005_07018058_07025374 LGI1A, LGI3 coding upstream 352501 7016841 ~ 7025374 (-)
G40313 NA non-coding downstream 2963 6651688 ~ 6651918 (-)
G40310 NA non-coding downstream 6513 6648152 ~ 6648368 (-)
G40228 NA non-coding downstream 99938 6508611 ~ 6554943 (-)
G40188 NA non-coding downstream 178004 6398299 ~ 6476877 (-)
G40316 NA non-coding upstream 15696 6680036 ~ 6681249 (-)
G40349 NA non-coding upstream 89476 6753816 ~ 6754017 (-)
G40378 NA non-coding upstream 274087 6938427 ~ 6938654 (-)
G40379 NA non-coding upstream 274751 6939091 ~ 6939294 (-)
G40382 NA non-coding upstream 278771 6943111 ~ 6945572 (-)
CI01000005_06481721_06483251 NA other downstream 171392 6481355 ~ 6483265 (-)
G39515 NA other downstream 820342 5833792 ~ 5834539 (-)
G38415 NA other downstream 2253771 4381238 ~ 4401110 (-)
G38510 NA other downstream 2448673 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 4765605 1883222 ~ 1899867 (-)
G40487 NA other upstream 531455 7195795 ~ 7196428 (-)
G40540 NA other upstream 861881 7526221 ~ 7532148 (-)

Expression


Co-expression Network