CI01000005_06609686_06619218 (COX15)


Basic Information

Item Value
gene id CI01000005_06609686_06619218
gene name COX15
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6609642 ~ 6619218 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06609686_06619218.mRNA
ATGGTGCTCCCGGTGCTCCGGCTGGTCGTGTCGTGTCGCTGTCAAACTGCGTGGAGGAACCTGCAGCAGATACAACGAACCCCTTTGAGACAATGGCTGCTGAAGAGAAGACAGACCACAGTGACCACAGAAAGTGGAAGTGCGTCAGCCAGATCCGTGTCGATTCCCAACGCAGCGACGGATCGTGTGATTGGCCGCTGGCTGCTGGGCTGCAGTGGGCTGGTTCTCGGCGCTGTGGTGCTGGGAGGAGTTACGAGATTGACGGAGTCCGGTCTGTCGATGGTTGACTGGCATTTAGTGAAAGAGATGAAGCCGCCACAGACTCAAGCGGAGTGGGAAGAGGAGTTCTCCAAGTACCAACAGTTCCCAGAGTTCAAAATCATGAATCACGACATGACTCTGAACGAGTTTAAGTTCATCTTTTACATGGAGTGGGGTCACCGCATGTGGGGCCGGCTGGTGGGATTAGCGTACATTCTTCCTGCGGTGTATTTCTGGAGAAGAAGATACTTCAGCCGCTCCATGAAGGCTCGTGTTTTGGGTCTTTGTGGCTTTGTCGTCTTCCAGGGTCTTCTGGGCTGGTACATGGTGAAGAGCGGCCTGGAGGAGAAGCCCGAGTCGTATGATGTTCCCCGTGTCAGTCAGTACAGACTGGCGGCTCACCTGGGCTCGGCTCTGCTGCTGTACTGCGCCAGTCTCTGGACGGGACTCACGCTCATGCTGCCGGCCACCAAGATTCCTGACAGCAGACATTTACTTCACCTGAGGCGGTTTGCCAAGGTTACAGGCGGTCTGGTCTTCCTCACGGCTCTCTCAGGTGCCTTTGTTGCTGGACTGGACGCAGGTTTGGTTTATAACTCTTTCCCAAAGATGGGCGAGCGCTGGATCCCTGACGATCTTCTGGCTTTTTCCCCAACCATCAAGAATGTGTTTGAAAACCCCACAACGGTTCAGTTTGACCACCGCATTCTGGGCATCGGCTCACTGACGGCCATCACAGGACTCTACCTGTTCTCCAGACGCGTCCTCCTGCCCCGCAGAGCAAAGATCGCGATCGGCTGTCTCACCGCCATGGCCTATACACAAGTGGTTCTGGGCATCAGCACCCTGCTTCTGTACGTTCCCACACCGCTGGCAGCGACGCATCAGTCCGGATCCGTGGCGCTGCTTACCTTCGCCATCTGGGTCCTGGCGGAGCTGCGGAAGGTGGTCAAGTAGATTGAGCTCAGATCCCATGATATAAGAAGGTATTTATTAATAAA

Function

symbol description
cox15 Predicted to enable oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor. Predicted to be involved in heme A biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in Leigh disease; fatal infantile cardioencephalomyopathy due to cytochrome c oxidase deficiency 2; and hypertrophic cardiomyopathy. Orthologous to human COX15 (cytochrome c oxidase assembly homolog COX15).

GO:

id name namespace
GO:0004129 cytochrome-c oxidase activity molecular_function

KEGG:

id description
K02259 COX15, ctaA; heme a synthase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06609686_06619218.mRNA True 1262 mRNA 0.55 9 6609642 6619218

Neighbor

gene id symbol gene type direction distance location
CI01000005_06567196_06595338 NRXN1 coding downstream 12203 6566909 ~ 6597439 (-)
CI01000005_06518032_06559301 NRXN1B, NRXN1 coding downstream 50206 6518032 ~ 6559436 (-)
CI01000005_06507647_06517258 NA coding downstream 92076 6507157 ~ 6517566 (-)
CI01000005_06481721_06483251 NA coding downstream 126391 6481355 ~ 6483265 (-)
CI01000005_06458571_06470774 NA coding downstream 138715 6458485 ~ 6470927 (-)
CI01000005_06623484_06646729 ABCC2 coding upstream 4126 6623344 ~ 6646729 (-)
CI01000005_06655061_06664135 NA coding upstream 35663 6654881 ~ 6664340 (-)
CI01000005_06721142_06724797 NA coding upstream 101690 6720908 ~ 6724833 (-)
CI01000005_06765592_06772165 NA coding upstream 146055 6765273 ~ 6772165 (-)
CI01000005_06772433_06793278 NVL coding upstream 153215 6772433 ~ 6793278 (-)
G40228 NA non-coding downstream 54699 6508611 ~ 6554943 (-)
G40188 NA non-coding downstream 132765 6398299 ~ 6476877 (-)
G40225 NA non-coding downstream 159101 6447184 ~ 6450541 (-)
G40196 NA non-coding downstream 206758 6392993 ~ 6402884 (-)
G40310 NA non-coding upstream 28934 6648152 ~ 6648368 (-)
G40313 NA non-coding upstream 32470 6651688 ~ 6651918 (-)
G40316 NA non-coding upstream 60818 6680036 ~ 6681249 (-)
G40349 NA non-coding upstream 134598 6753816 ~ 6754017 (-)
G40378 NA non-coding upstream 319209 6938427 ~ 6938654 (-)
G39515 NA other downstream 775103 5833792 ~ 5834539 (-)
G38415 NA other downstream 2208532 4381238 ~ 4401110 (-)
G38510 NA other downstream 2403434 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 4720366 1883222 ~ 1899867 (-)
G40487 NA other upstream 576577 7195795 ~ 7196428 (-)
G40540 NA other upstream 907003 7526221 ~ 7532148 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005680 cox15 coding NC_007124.7 CM002897.2 713941 ~ 724385 (+)