CI01000005_06765592_06772165


Basic Information

Item Value
gene id CI01000005_06765592_06772165
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 6765273 ~ 6772165 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_06765592_06772165.mRNA
ATGAACAGATCTCGTTTATGGTGCTGGAAGGATCCACCACTGACATCATCCTGGGATGCCCGTGGATGTTACAAGAAATGTCCCAACACGATCCCAACATCAACTGGAACTCTGGGGAGATGCTGTAATGGAGTGAGTCCTGCTTTCACGTATGCCTGTCTCCGGTTGTCAAACCTCCTGTTCGTCGTCCCAAAGTTTCGCAGTAACGAGGACATTGTCAGATCTCATGCTGGACCAAATGTGAGCGCCACAGCTCAGAGTGGAAGCCATATTTCAGCACCTGTACTCACTAACAATACAATAACAGGCAATGTCCACATCATACATAATGCACCAGGTTTTACTTGGAATCGCCCACCCTCTGAAAAAACTCAAACCTCGGGATCAAGGTCAGTGATTTTAAAACATAAGACGCAGATCTGCAGTGAGTATCGGTATGTGACCGAGTATAACTCACTGCCTGGTGAACATGTGCTGCTTTCTGAGCGCTACATACAACCGCTGATCCTTAAGAGACATAGAGATCAAAAAGAGAGAGAAGAAGAGATCTGCTCCAGTGGAGAGAGCTTCCAGCAGCTCCTCTGCTCCAGGAGCATTGATGACTCTGTCCGGGATCTGAACACTCTGTTCGACACAGATGAGCATGGGATCAGTCCTAGTGCTGTTATACTGCAGGGAAATTCTGGAAACGGGAAATCTTTCACTGTGCAGAAGATCATGATGGACTGGGCATCTGGTGACCTCTACAAAGAGCGGTTTGATGTTGTGTTCCACTTAAAGTGTAAAGAAATTAACCGCATTCTTGCCGAAAAGAGTTTGGCGGAGATCTTGAGCTGCAGTTGTAGTTTAACATCAGATCAGATCTCACAGGTACTACAGCATTCACCAGAGAAGGTGCTCTTCATCATTGATGGATTTGATGAGCTGAGACTCACACCGGATGTTTATGACATATCGCCACACACTGATCTGCTTCAGAAAGCCCCAGCTGAGGTCATTCTTTGTGACCTGCTGAGGGGTCGAATCCTGCCAGAGTCCTTCCTGCTGGTCACTACCAGATCTACAGCCACAGACACACTGAGTAAACTGCTCAAAGGACCTCATCGTTTCTCTGAGATAATTGGTTTCTCTGAGAAGGGGGTGAAGGAGTACTTCCAGAAGTTTTTTCAAATTGAGGAAGTTTTCAGGAAGGCTTATACATTTGTGGAGACAAATGAAACTCTCATCACTGCCTGCTCCATCCCTGTCATCTGCTGGATCATCTGCACAACTATCAAGGAACGATTCAAAATTGGTGCAGATGTAACAAGCGGACTGGGAACCATCACCTCCATCTACGTTGACTTTGTGTCCACTCTGCTGGATCATCACTGCCAGGGTTTGAGTCAATCCGTCCCGACCCTGCTGAGGAGTCTGGGTCAGCTGGCAGAGAGAGGGATGCTGGAACAGCAAGTCTTGTTTGATGGGAAAAGTGTTTATGAAACAGTTTCAGACCCTGCTGGCAGTCCGTTCCTGTGCAAGTTCCTGTTTAAGAGAAGAATCTACCAGGAGACGATGTTCAGTTTCATGCATCTCAGCTTTCAGGAGTTCTTCACTGCTCTGTACTATGTCCTTCTGGATGAAGAAGAGTCCCAAAGAAAACTCACTCAGCTATATTCCAGTGATAAAAACTCAAGTGATTATCACACTCGTCCTCCACGCTTTGCAGCTGTGGCGCAATTTGCTTTTGGTCTGCTGAATAAGGATGTGAGATGCACACTTGAAACACATGGTCTCTTTGTTCATCCACAAACACAGGCTCATCTGAAAGAATGGATTTTGGAAGAGCTTCAAAGTAATAACATGTATTCGAATAGAGCAGTTTTTTTCCTTCACTGTCTCTATGAACTTCATGAAGAGGACTTTGTGAAAGAAGCTATGGAAGCCTGGAACAGAATTAACACATATGGTGCAGTCCTAAGAGGAACAGACTGCTGGGCCCTGCAGTACTGCGCTCAGTGCGTTCAGTGCATTGAAGAACTGTATCTGAACAGCGGTTTACCATCTGAAATGGTGCTTATGATTCTGCCTTTTTTCCACAAGTTCAAGAGAGTAAGCTATGATCTCTGCTTCCTATTAAGAAATTCACTTCAGTCAATCAGTGAAGAGCTAAACAGTATTCAAATATGTCCTCCATGGTATAGAAACCCAGGAGCATCTTTGCGATTACTCATTCTCACCTTTCCAAACGAAGATCTAAAAAACTTAGACTGGATCAGATTTTCTCAGAAAATTCACCAAGGAGATTCAGATGCATTGATGTCTGTTGTCTATTCTTTCTCTAAACTGAAAAGGATAGAAATAGAAGTGGACTGTCTAAGTGAGATGTGGTCTGTTTGGACCCTCCAAATCATCCAGAAGTGCTCCAGTCTAACAGAACTCGTGTTCATGTGCAAAAAACGCAAATGCACACGTTATGAGGACTATCATCTTCGCTGCAACCAGAAGGTGAAGATTCATCTGAATTCCCAGGGCTTTTCTATGGAGATTATGTGAAAGTAAGTTAATACTAAGATTAACAGAATGCCACTTGCACCAGTAACCATGAGAACTGTAATGATGATGATGTAATATGATATGAGTATATTAAATGTACAAGCTTTCAGTGCAATAGCATATAATCATAGTGTGCAGTGTGGATCTTAACCTAATGGTCAGCTCTGTATACAGACATATTCTACATGACTTATCATGTGTTTTATCTCTTGTCTCTCTCCATTTCTAAGGCCCTTGTTTTGTAACTGATGGTACAGCTTGATAACCAGAAGAAACTGCCAAAGCAGCATCTTTACCTAGAGCTGTGGATGGGAATAAA

Function

NR:

description
cryopyrin-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_06765592_06772165.mRNA True 2854 mRNA 0.44 7 6765273 6772165

Neighbor

gene id symbol gene type direction distance location
CI01000005_06721142_06724797 NA coding downstream 40440 6720908 ~ 6724833 (-)
CI01000005_06655061_06664135 NA coding downstream 100933 6654881 ~ 6664340 (-)
CI01000005_06623484_06646729 ABCC2 coding downstream 118544 6623344 ~ 6646729 (-)
CI01000005_06609686_06619218 COX15 coding downstream 146055 6609642 ~ 6619218 (-)
CI01000005_06567196_06595338 NRXN1 coding downstream 167834 6566909 ~ 6597439 (-)
CI01000005_06772433_06793278 NVL coding upstream 268 6772433 ~ 6793278 (-)
CI01000005_06815976_06894322 SLIT1A, SLIT1 coding upstream 43213 6815378 ~ 6894585 (-)
CI01000005_07018058_07025374 LGI1A, LGI3 coding upstream 244676 7016841 ~ 7025374 (-)
CI01000005_07035672_07037203 NA coding upstream 262612 7034777 ~ 7037276 (-)
CI01000005_07052874_07068345 NA coding upstream 280565 7052730 ~ 7068377 (-)
G40349 NA non-coding downstream 11256 6753816 ~ 6754017 (-)
G40316 NA non-coding downstream 84024 6680036 ~ 6681249 (-)
G40313 NA non-coding downstream 113355 6651688 ~ 6651918 (-)
G40310 NA non-coding downstream 116905 6648152 ~ 6648368 (-)
G40228 NA non-coding downstream 210330 6508611 ~ 6554943 (-)
G40378 NA non-coding upstream 166262 6938427 ~ 6938654 (-)
G40379 NA non-coding upstream 166926 6939091 ~ 6939294 (-)
G40382 NA non-coding upstream 170946 6943111 ~ 6945572 (-)
G40403 NA non-coding upstream 221152 6993317 ~ 7090894 (-)
G40407 NA non-coding upstream 225417 6997582 ~ 6998343 (-)
CI01000005_06481721_06483251 NA other downstream 281784 6481355 ~ 6483265 (-)
G39515 NA other downstream 930734 5833792 ~ 5834539 (-)
G38415 NA other downstream 2364163 4381238 ~ 4401110 (-)
G38510 NA other downstream 2559065 4204845 ~ 4206208 (-)
CI01000005_01883894_01899867 NA other downstream 4875997 1883222 ~ 1899867 (-)
G40487 NA other upstream 423630 7195795 ~ 7196428 (-)
G40540 NA other upstream 754056 7526221 ~ 7532148 (-)

Expression


Co-expression Network