Gene
RNA
| Item | Value |
|---|---|
| gene id | G40382 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000005 |
| NCBI id | null |
| chromosome length | 7630583 |
| location | 6943111 ~ 6945572 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106605384, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU45775 | True | 298 | lncRNA | 0.51 | 2 | 6943111 | 6945572 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000005_06815976_06894322 | SLIT1A, SLIT1 | coding | downstream | 48526 | 6815378 ~ 6894585 (-) |
| CI01000005_06772433_06793278 | NVL | coding | downstream | 149833 | 6772433 ~ 6793278 (-) |
| CI01000005_06765592_06772165 | NA | coding | downstream | 170946 | 6765273 ~ 6772165 (-) |
| CI01000005_06721142_06724797 | NA | coding | downstream | 218278 | 6720908 ~ 6724833 (-) |
| CI01000005_06655061_06664135 | NA | coding | downstream | 278771 | 6654881 ~ 6664340 (-) |
| CI01000005_07018058_07025374 | LGI1A, LGI3 | coding | upstream | 71269 | 7016841 ~ 7025374 (-) |
| CI01000005_07035672_07037203 | NA | coding | upstream | 89205 | 7034777 ~ 7037276 (-) |
| CI01000005_07052874_07068345 | NA | coding | upstream | 107158 | 7052730 ~ 7068377 (-) |
| CI01000005_07093538_07094533 | NA | coding | upstream | 147910 | 7093482 ~ 7094569 (-) |
| CI01000005_07111233_07112234 | NA | coding | upstream | 165150 | 7110722 ~ 7112266 (-) |
| G40379 | NA | non-coding | downstream | 3817 | 6939091 ~ 6939294 (-) |
| G40378 | NA | non-coding | downstream | 4457 | 6938427 ~ 6938654 (-) |
| G40349 | NA | non-coding | downstream | 189094 | 6753816 ~ 6754017 (-) |
| G40316 | NA | non-coding | downstream | 261862 | 6680036 ~ 6681249 (-) |
| G40313 | NA | non-coding | downstream | 291193 | 6651688 ~ 6651918 (-) |
| G40403 | NA | non-coding | upstream | 47745 | 6993317 ~ 7090894 (-) |
| G40407 | NA | non-coding | upstream | 52010 | 6997582 ~ 6998343 (-) |
| G40408 | NA | non-coding | upstream | 53681 | 6999253 ~ 6999872 (-) |
| G40402 | NA | non-coding | upstream | 115015 | 7060587 ~ 7065300 (-) |
| G40472 | NA | non-coding | upstream | 209789 | 7155361 ~ 7155615 (-) |
| CI01000005_06481721_06483251 | NA | other | downstream | 459622 | 6481355 ~ 6483265 (-) |
| G39515 | NA | other | downstream | 1108572 | 5833792 ~ 5834539 (-) |
| G38415 | NA | other | downstream | 2542001 | 4381238 ~ 4401110 (-) |
| G38510 | NA | other | downstream | 2736903 | 4204845 ~ 4206208 (-) |
| CI01000005_01883894_01899867 | NA | other | downstream | 5053835 | 1883222 ~ 1899867 (-) |
| G40487 | NA | other | upstream | 250223 | 7195795 ~ 7196428 (-) |
| G40540 | NA | other | upstream | 580649 | 7526221 ~ 7532148 (-) |
