Gene
RNA
| Item | Value |
|---|---|
| gene id | G40408 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000005 |
| NCBI id | null |
| chromosome length | 7630583 |
| location | 6999253 ~ 6999872 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU45820 | True | 397 | lncRNA | 0.36 | 3 | 6999253 | 6999872 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000005_06815976_06894322 | SLIT1A, SLIT1 | coding | downstream | 104668 | 6815378 ~ 6894585 (-) |
| CI01000005_06772433_06793278 | NVL | coding | downstream | 205975 | 6772433 ~ 6793278 (-) |
| CI01000005_06765592_06772165 | NA | coding | downstream | 227088 | 6765273 ~ 6772165 (-) |
| CI01000005_06721142_06724797 | NA | coding | downstream | 274420 | 6720908 ~ 6724833 (-) |
| CI01000005_06655061_06664135 | NA | coding | downstream | 334913 | 6654881 ~ 6664340 (-) |
| CI01000005_07018058_07025374 | LGI1A, LGI3 | coding | upstream | 16969 | 7016841 ~ 7025374 (-) |
| CI01000005_07035672_07037203 | NA | coding | upstream | 34905 | 7034777 ~ 7037276 (-) |
| CI01000005_07052874_07068345 | NA | coding | upstream | 52858 | 7052730 ~ 7068377 (-) |
| CI01000005_07093538_07094533 | NA | coding | upstream | 93610 | 7093482 ~ 7094569 (-) |
| CI01000005_07111233_07112234 | NA | coding | upstream | 110850 | 7110722 ~ 7112266 (-) |
| G40407 | NA | non-coding | downstream | 910 | 6997582 ~ 6998343 (-) |
| G40382 | NA | non-coding | downstream | 53681 | 6943111 ~ 6945572 (-) |
| G40379 | NA | non-coding | downstream | 59959 | 6939091 ~ 6939294 (-) |
| G40378 | NA | non-coding | downstream | 60599 | 6938427 ~ 6938654 (-) |
| G40349 | NA | non-coding | downstream | 245236 | 6753816 ~ 6754017 (-) |
| G40402 | NA | non-coding | upstream | 60715 | 7060587 ~ 7065300 (-) |
| G40472 | NA | non-coding | upstream | 155489 | 7155361 ~ 7155615 (-) |
| G40497 | NA | non-coding | upstream | 220139 | 7220011 ~ 7220359 (-) |
| G40499 | NA | non-coding | upstream | 222735 | 7222607 ~ 7222893 (-) |
| G40503 | NA | non-coding | upstream | 231734 | 7231606 ~ 7231852 (-) |
| CI01000005_06481721_06483251 | NA | other | downstream | 515764 | 6481355 ~ 6483265 (-) |
| G39515 | NA | other | downstream | 1164714 | 5833792 ~ 5834539 (-) |
| G38415 | NA | other | downstream | 2598143 | 4381238 ~ 4401110 (-) |
| G38510 | NA | other | downstream | 2793045 | 4204845 ~ 4206208 (-) |
| CI01000005_01883894_01899867 | NA | other | downstream | 5109977 | 1883222 ~ 1899867 (-) |
| G40487 | NA | other | upstream | 195923 | 7195795 ~ 7196428 (-) |
| G40540 | NA | other | upstream | 526349 | 7526221 ~ 7532148 (-) |
