CI01000005_07591912_07592984


Basic Information

Item Value
gene id CI01000005_07591912_07592984
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 7591912 ~ 7592991 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_07591912_07592984.mRNA
AGTCGCGATGGCGTCTGATCTGAGGAAACAACTGGAAGAGTTTCTCAAGCGTCTGAACATTGACACGATCTGCATCGATCATCCAGAGGTGTTCACGGTGGAGGAGATGATGCCTCATGTGGCTCATCTGAGCGGCGCGGTCACTAAAAACCTCTTCCTGAAAGACAAGAAGAAGAAGAGCCTGTGGCTGCTGTCCGTCCGGCACGACCGGCAGCTGGACCTCAGCGACGTGTCCAAGCGCCTGGGCCTCGGCGGAGGAAACCTGCGTCTGGCGGACGAGGCGCTGCTGCTGGAGAAGCTGCAGGTGCGTCAGGGCTGCGTGACGGCGCTCGCGCTCTTCTGCGACACGGACCAGAGCGTGAAGGTGGTGCTGGACCGCGATCTGACCCACGGCGGACACGAGCGCGTCTATTTCCACCCCATGACCAACAGCGCCACCATGGGACTCAAACCAGACGACCTGCTGCGCTTCCTGAAGGAGACCAAACACGAGCCAGTCGTCCTGAGCTTCGACTGA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_07591912_07592984.mRNA True 517 mRNA 0.60 2 7591912 7592991

Neighbor

gene id symbol gene type direction distance location
CI01000005_07436839_07437813 NA coding downstream 153488 7436065 ~ 7438424 (-)
CI01000005_07398684_07399164 MPC1.S, MPC1, MPC1.L coding downstream 192748 7398487 ~ 7399164 (-)
CI01000005_07373961_07374634 NA coding downstream 217278 7373410 ~ 7374634 (-)
CI01000005_07355833_07360372 NA coding downstream 231540 7355833 ~ 7360372 (-)
CI01000005_07190084_07218097 NA coding downstream 373779 7189596 ~ 7218133 (-)
CI01000005_07593934_07596058 RPS27A, DENND5B coding upstream 935 7593926 ~ 7596058 (-)
CI01000005_07617632_07620944 NA coding upstream 24574 7617565 ~ 7620944 (-)
CI01000005_07622471_07624184 NA coding upstream 28349 7621340 ~ 7624184 (-)
G40586 NA non-coding downstream 107389 7484324 ~ 7484523 (-)
G40585 NA non-coding downstream 110190 7481523 ~ 7481722 (-)
G40580 NA non-coding downstream 123674 7458821 ~ 7468238 (-)
G40566 NA non-coding downstream 164000 7427699 ~ 7427912 (-)
G40564 NA non-coding downstream 165946 7425711 ~ 7425966 (-)
G40602 NA non-coding upstream 7554 7600545 ~ 7602965 (-)
G40604 NA non-coding upstream 13058 7606049 ~ 7606279 (-)
G40540 NA other downstream 59764 7526221 ~ 7532148 (-)
G40487 NA other downstream 395484 7195795 ~ 7196428 (-)
CI01000005_06481721_06483251 NA other downstream 1108423 6481355 ~ 6483265 (-)
G39515 NA other downstream 1757373 5833792 ~ 5834539 (-)
G38415 NA other downstream 3190802 4381238 ~ 4401110 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_005657 zgc:64201 coding NC_007124.7 CM002897.2 228045 ~ 229022 (+)